Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Exonuclease, RNase T/DNA polymerase III

Term: IPR013520  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1868 SustainPine v2.0 1402
AutoFact: exonuclease family protein [Arabidopsis thaliana] dbj|BAB11450.1| exonuclease-like protein [Arabidopsis thaliana] gb|AED91196.1| exonuclease family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: exonuclease family protein 0.0
N-terminus
sp_v2.0_unigene4601 SustainPine v2.0 1206
AutoFact: 3'-5' exoribonuclease 1 [Gallus gallus] emb|CAG31592.1| hypothetical protein RCJMB04_8i1 [Gallus gallus] 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized exonuclease domain-containing protein at3g15140-like 0.0
C-terminus
sp_v2.0_unigene8280 SustainPine v2.0 1202
AutoFact: exonuclease-like protein [Arabidopsis thaliana] gb|ACF16171.1| At3g27970 [Arabidopsis thaliana] dbj|BAH30474.1| hypothetical protein [Arabidopsis thaliana] gb|AEE77388.1| exonuclease-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exonuclease-like protein 0.0
C-terminus
sp_v2.0_unigene8299 SustainPine v2.0 1187
AutoFact: oligoribonuclease [Arabidopsis thaliana] dbj|BAH19818.1| AT2G26970 [Arabidopsis thaliana] gb|AEC07913.1| oligoribonuclease [Arabidopsis thaliana] 0.0
FL-Next: sp=Oligoribonuclease; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: oligoribonuclease 0.0
Complete
sp_v2.0_unigene9292 SustainPine v2.0 2434
AutoFact: small RNA degrading nuclease 3 [Arabidopsis thaliana] sp|Q8RXK2.1|SDN3_ARATH RecName: Full=Small RNA degrading nuclease 3 gb|AAL87318.1| unknown protein [Arabidopsis thaliana] gb|AAN71976.1| unknown protein [Arabidopsis thaliana] gb|AED98317.1| small RNA 0.0
FL-Next: sp=Small RNA degrading nuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: small rna degrading nuclease 3 0.0
N-terminus
sp_v2.0_unigene9505 SustainPine v2.0 1524
AutoFact: RNA exonuclease, putative n=1 Tax=Ricinus communis RepID=B9RXA0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exonuclease-like protein 0.0
Complete
sp_v2.0_unigene14382 SustainPine v2.0 412
AutoFact: Oligoribonuclease, putative n=1 Tax=Cryptococcus neoformans var. neoformans JEC21 RepID=Q5KPH7_CRYNJ 9.99967e-42
FL-Next: sp=Oligoribonuclease; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: oligoribonuclease 0.0
Internal
sp_v2.0_unigene18048 SustainPine v2.0 1703
AutoFact: oligoribonuclease [Arabidopsis thaliana] sp|Q9ZVE0.2|ORN_ARATH RecName: Full=Oligoribonuclease gb|AAL36387.1| unknown protein [Arabidopsis thaliana] gb|AAN71962.1| unknown protein [Arabidopsis thaliana] gb|AEC07912.1| oligoribonuclease [Arabidopsis thalia 0.0
FL-Next: sp=Oligoribonuclease; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: oligoribonuclease 0.0
Complete
sp_v2.0_unigene24970 SustainPine v2.0 1089
AutoFact: Rnase h, putative n=1 Tax=Ricinus communis RepID=B9S2M9_RICCO 0.0
FL-Next: sp=Small RNA degrading nuclease 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: small rna degrading nuclease 5-like 0.0
Putative C-terminus
sp_v2.0_unigene25396 SustainPine v2.0 761
AutoFact: Os10g0407500 protein n=4 Tax=Oryza sativa RepID=Q0IXT1_ORYSJ 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: exonuclease family protein 1.4013e-45
C-terminus
sp_v2.0_unigene25455 SustainPine v2.0 2349
AutoFact: Histone mRNA exonuclease 1 n=3 Tax=Andropogoneae RepID=B6THB1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 exoribonuclease 0.0
Complete
sp_v2.0_unigene26190 SustainPine v2.0 1200
AutoFact: Small RNA degrading nuclease 5 n=2 Tax=Arabidopsis thaliana RepID=SDN5_ARATH 1.0e-28
FL-Next: sp=Small RNA degrading nuclease 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: small rna degrading nuclease 5-like 1.52307e-28
Putative N-terminus
sp_v2.0_unigene26552 SustainPine v2.0 1371
AutoFact: DNA polymerase III subunit epsilon n=3 Tax=Zea mays RepID=B6TZF8_MAIZE 0.0
FL-Next: tr=DNA polymerase III subunit epsilon; Zea mays (Maize). 0.0
Blast2go: dna polymerase iii polc-type-like 0.0
Complete
sp_v2.0_unigene27823 SustainPine v2.0 1292
AutoFact: exonuclease family protein [Arabidopsis thaliana] ref|NP_851082.1| exonuclease family protein [Arabidopsis thaliana] ref|NP_851083.1| exonuclease family protein [Arabidopsis thaliana] ref|NP_974842.1| exonuclease family protein [Arabidopsis thaliana] dbj| 7.0e-11
FL-Next: tr=DNA polymerase III subunit epsilon; Zea mays (Maize). 0.0
Blast2go: dna polymerase iii polc-type 3.58179e-16
Complete
sp_v2.0_unigene33405 SustainPine v2.0 863
AutoFact: Exonuclease family protein n=4 Tax=Arabidopsis RepID=Q700D3_ARATH 6.0e-36
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: exonuclease-like protein 5.15678e-43
N-terminus
sp_v2.0_unigene40131 SustainPine v2.0 508
AutoFact: exonuclease-like protein [Arabidopsis thaliana] 3.0e-22
FL-Next: Isoform 2 of Small RNA degrading nuclease 5 OS=Arabidopsis thaliana GN=SDN5 0.0
Blast2go: small rna degrading nuclease 5-like 1.16204e-26
N-terminus
sp_v2.0_unigene56877 SustainPine v2.0 1106
AutoFact: Small RNA degrading nuclease 5 n=2 Tax=Arabidopsis thaliana RepID=SDN5_ARATH 9.0e-29
FL-Next: sp=Small RNA degrading nuclease 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: small rna degrading nuclease 5-like 1.32479e-28
Internal
sp_v2.0_unigene64192 SustainPine v2.0 550
AutoFact: Rnase h, putative n=1 Tax=Ricinus communis RepID=B9S2M9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small rna degrading nuclease 5-like 0.0
Internal
sp_v2.0_unigene77338 SustainPine v2.0 500
AutoFact: exonuclease family protein [Arabidopsis thaliana] ref|NP_851082.1| exonuclease family protein [Arabidopsis thaliana] ref|NP_851083.1| exonuclease family protein [Arabidopsis thaliana] ref|NP_974842.1| exonuclease family protein [Arabidopsis thaliana] dbj| 9.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna polymerase iii polc-type 2.33849e-23
Internal
sp_v2.0_unigene85963 SustainPine v2.0 150
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized exonuclease domain-containing protein 2.11969e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain