Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Exoribonuclease, phosphorolytic domain 2

Term: IPR015847  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene649 SustainPine v2.0 1173
AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp43-like 0.0
Complete
sp_v2.0_unigene806 SustainPine v2.0 2290
AutoFact: Exosome complex exonuclease rrp45, putative n=1 Tax=Ricinus communis RepID=B9SYQ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: 3 -5 -exoribonuclease cer7 protein 0.0
Complete
sp_v2.0_unigene2757 SustainPine v2.0 1042
AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 0.0
Putative C-terminus
sp_v2.0_unigene5495 SustainPine v2.0 1047
AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 3.0e-40
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 4.2039e-45
Putative N-terminus
sp_v2.0_unigene5644 SustainPine v2.0 602
AutoFact: Polynucleotide phosphorylase n=1 Tax=Pisum sativum RepID=O24288_PEA 0.0
FL-Next: tr=Polynucleotide phosphorylase; Pisum sativum (Garden pea). 0.0
Blast2go: polynucleotide phosphorylase 0.0
Internal
sp_v2.0_unigene9192 SustainPine v2.0 1404
AutoFact: exosome complex component RRP41 [Arabidopsis thaliana] ref|NP_001118878.1| exosome complex component RRP41 [Arabidopsis thaliana] gb|AAF04590.1|AF191741_1 exonuclease RRP41 [Arabidopsis thaliana] emb|CAB71092.1| exonuclease RRP41 [Arabidopsis thaliana] db 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp41 0.0
Complete
sp_v2.0_unigene12012 SustainPine v2.0 1743
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex exonuclease rrp42 0.0
Complete
sp_v2.0_unigene13334 SustainPine v2.0 302
AutoFact: Polyribonucleotide phophorylase (Fragment) n=1 Tax=Spinacia oleracea RepID=Q41370_SPIOL 2.0e-30
FL-Next: tr=Putative uncharacterized protein Sb02g003900; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 9.65427e-38
Internal
sp_v2.0_unigene30059 SustainPine v2.0 589
AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 0.0
Internal
sp_v2.0_unigene33553 SustainPine v2.0 594
AutoFact: 3'-5'-exoribonuclease/RNA binding protein-like protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp43-like 0.0
N-terminus
sp_v2.0_unigene34951 SustainPine v2.0 414
AutoFact: 3'-5'-exoribonuclease/RNA binding protein-like protein n=2 Tax=Solanum tuberosum RepID=Q2PYZ2_SOLTU 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp43-like 1.76948e-27
Internal
sp_v2.0_unigene36280 SustainPine v2.0 545
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: exosome complex exonuclease rrp42 0.0
Internal
sp_v2.0_unigene37614 SustainPine v2.0 501
AutoFact: Polynucleotide phosphorylase n=2 Tax=Arabidopsis RepID=Q9S7G6_ARATH 0.0
FL-Next: tr=Polynucleotide phosphorylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 0.0
Internal
sp_v2.0_unigene46317 SustainPine v2.0 471
AutoFact: polyribonucleotide phophorylase [Spinacia oleracea] 1.0e-18
FL-Next: tr=Polynucleotide phosphorylase; Pisum sativum (Garden pea). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 7.68769e-23
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain