Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Exoribonuclease, phosphorolytic domain 1

Term: IPR001247  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene649 SustainPine v2.0 1173
AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp43-like 0.0
Complete
sp_v2.0_unigene806 SustainPine v2.0 2290
AutoFact: Exosome complex exonuclease rrp45, putative n=1 Tax=Ricinus communis RepID=B9SYQ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: 3 -5 -exoribonuclease cer7 protein 0.0
Complete
sp_v2.0_unigene1249 SustainPine v2.0 1424
AutoFact: Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3 exoribonuclease [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp46 0.0
Complete
sp_v2.0_unigene2757 SustainPine v2.0 1042
AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 0.0
Putative C-terminus
sp_v2.0_unigene5495 SustainPine v2.0 1047
AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 3.0e-40
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 4.2039e-45
Putative N-terminus
sp_v2.0_unigene5644 SustainPine v2.0 602
AutoFact: Polynucleotide phosphorylase n=1 Tax=Pisum sativum RepID=O24288_PEA 0.0
FL-Next: tr=Polynucleotide phosphorylase; Pisum sativum (Garden pea). 0.0
Blast2go: polynucleotide phosphorylase 0.0
Internal
sp_v2.0_unigene9192 SustainPine v2.0 1404
AutoFact: exosome complex component RRP41 [Arabidopsis thaliana] ref|NP_001118878.1| exosome complex component RRP41 [Arabidopsis thaliana] gb|AAF04590.1|AF191741_1 exonuclease RRP41 [Arabidopsis thaliana] emb|CAB71092.1| exonuclease RRP41 [Arabidopsis thaliana] db 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp41 0.0
Complete
sp_v2.0_unigene11824 SustainPine v2.0 426
AutoFact: Magnesium chelatase H subunit n=6 Tax=core eudicotyledons RepID=D5KXY0_VITVI 0.0
FL-Next: tr=Magnesium-chelatase subunit H, putative; Ricinus communis (Castor bean). 0.0
Blast2go: magnesium chelatase h subunit 0.0
Internal
sp_v2.0_unigene12012 SustainPine v2.0 1743
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex exonuclease rrp42 0.0
Complete
sp_v2.0_unigene13334 SustainPine v2.0 302
AutoFact: Polyribonucleotide phophorylase (Fragment) n=1 Tax=Spinacia oleracea RepID=Q41370_SPIOL 2.0e-30
FL-Next: tr=Putative uncharacterized protein Sb02g003900; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 9.65427e-38
Internal
sp_v2.0_unigene15019 SustainPine v2.0 992
AutoFact: protoporphyrin IX:Mg Chelatase [Antirrhinum majus] 0.0
FL-Next: tr=Magnesium chelatase H subunit; Camellia sinensis (Tea). 0.0
Blast2go: magnesium chelatase h subunit 0.0
Putative N-terminus
sp_v2.0_unigene20180 SustainPine v2.0 413
AutoFact: Mg protoporphyrin IX chelatase n=2 Tax=Nicotiana tabacum RepID=O22435_TOBAC 0.0
FL-Next: tr=Mg protoporphyrin IX chelatase; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: magnesium chelatase h subunit 0.0
Internal
sp_v2.0_unigene25987 SustainPine v2.0 1256
AutoFact: Magnesium chelatase H subunit n=6 Tax=core eudicotyledons RepID=D5KXY0_VITVI 0.0
FL-Next: tr=Os03g0323200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: magnesium chelatase h subunit 0.0
Internal
sp_v2.0_unigene26431 SustainPine v2.0 1596
AutoFact: putative exoribonuclease [Oryza sativa Japonica Group] gb|ABF99850.1| 3' exoribonuclease family, domain 1 containing protein, expressed [Oryza sativa Japonica Group] gb|EAZ29273.1| hypothetical protein OsJ_13338 [Oryza sativa Japonica Group] dbj|BAH00946. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component mtr3-like 0.0
Complete
sp_v2.0_unigene26981 SustainPine v2.0 1927
AutoFact: magnesium chelatase subunit [Glycine max] 0.0
FL-Next: tr=Magnesium-chelatase subunit H, putative; Ricinus communis (Castor bean). 0.0
Blast2go: magnesium chelatase h subunit 0.0
C-terminus
sp_v2.0_unigene30059 SustainPine v2.0 589
AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 0.0
Internal
sp_v2.0_unigene33553 SustainPine v2.0 594
AutoFact: 3'-5'-exoribonuclease/RNA binding protein-like protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp43-like 0.0
N-terminus
sp_v2.0_unigene34951 SustainPine v2.0 414
AutoFact: 3'-5'-exoribonuclease/RNA binding protein-like protein n=2 Tax=Solanum tuberosum RepID=Q2PYZ2_SOLTU 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp43-like 1.76948e-27
Internal
sp_v2.0_unigene36280 SustainPine v2.0 545
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: exosome complex exonuclease rrp42 0.0
Internal
sp_v2.0_unigene37614 SustainPine v2.0 501
AutoFact: Polynucleotide phosphorylase n=2 Tax=Arabidopsis RepID=Q9S7G6_ARATH 0.0
FL-Next: tr=Polynucleotide phosphorylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain