Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, GRF-type

Term: IPR010666  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene6025 SustainPine v2.0 1679
AutoFact: CCHC-type zinc knuckle protein [Arabidopsis thaliana] emb|CAB86673.1| putative protein [Arabidopsis thaliana] gb|AAL38752.1| unknown protein [Arabidopsis thaliana] gb|AAM91719.1| unknown protein [Arabidopsis thaliana] gb|AEE77756.1| CCHC-type zinc knuckle 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc knuckle (cchc-type) family protein 0.0
Complete
sp_v2.0_unigene17073 SustainPine v2.0 1139
AutoFact: GRF zinc finger family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXT9_ORYSJ 9.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 5 3.08286e-44
Complete
sp_v2.0_unigene25455 SustainPine v2.0 2349
AutoFact: Histone mRNA exonuclease 1 n=3 Tax=Andropogoneae RepID=B6THB1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 exoribonuclease 0.0
Complete
sp_v2.0_unigene25611 SustainPine v2.0 524
AutoFact: GRF zinc finger family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXT9_ORYSJ 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 5 0.0
Complete
sp_v2.0_unigene26875 SustainPine v2.0 996
AutoFact: GRF zinc finger family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXT9_ORYSJ 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 5 2.80527e-40
Complete
sp_v2.0_unigene29533 SustainPine v2.0 644
AutoFact: endonuclease 2 [Arabidopsis thaliana] gb|AEE86607.1| endonuclease 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: endonuclease 2 0.0
Internal
sp_v2.0_unigene48961 SustainPine v2.0 322
AutoFact: Ap endonuclease, putative n=1 Tax=Ricinus communis RepID=B9S6N7_RICCO 3.0e-26
FL-Next: tr=Ap endonuclease, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna-(apurinic or apyrimidinic site) lyase 2-like 6.97827e-26
Internal
sp_v2.0_unigene60641 SustainPine v2.0 645
AutoFact: GRF zinc finger family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXT9_ORYSJ 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 5 0.0
Complete
sp_v2.0_unigene73036 SustainPine v2.0 307
AutoFact: DNA topoisomerase n=1 Tax=Sorghum bicolor RepID=C5WWW3_SORBI 3.0e-37
FL-Next: sp=DNA topoisomerase; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: dna topoisomerase iii 4.2039e-44
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain