Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Translation elongation factor EF1B/ribosomal protein S6

Term: IPR014717  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene914 SustainPine v2.0 1085
• AutoFact: 30S ribosomal protein S6 alpha [Arabidopsis thaliana] sp|Q8VY91.1|RR6_ARATH RecName: Full=30S ribosomal protein S6 alpha, chloroplastic; Flags: Precursor gb|AAL61951.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana] gb|AAM47900.1| plastid r 5.04467e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene15603 SustainPine v2.0 1297
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor 1-beta 0.0
Complete
sp_v2.0_unigene15657 SustainPine v2.0 1558
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor 1- 0.0
Complete
sp_v2.0_unigene17876 SustainPine v2.0 988
• AutoFact: Ribosomal protein S6 [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s6 0.0
Putative Complete
sp_v2.0_unigene18137 SustainPine v2.0 1358
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor 1-delta 1 0.0
Complete
sp_v2.0_unigene18339 SustainPine v2.0 858
• AutoFact: small subunit ribosomal protein S6 [Arabidopsis thaliana] dbj|BAB01802.1| unnamed protein product [Arabidopsis thaliana] gb|AAM67031.1| unknown [Arabidopsis thaliana] dbj|BAC42712.1| unknown protein [Arabidopsis thaliana] gb|AAO50729.1| unknown protein [A 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small subunit ribosomal protein s6 0.0
Complete
sp_v2.0_unigene21822 SustainPine v2.0 536
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor 1-delta 1 0.0
N-terminus
sp_v2.0_unigene26788 SustainPine v2.0 978
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small subunit ribosomal protein s6 0.0
Complete
sp_v2.0_unigene33452 SustainPine v2.0 1159
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small subunit ribosomal protein s6 0.0
Complete
sp_v2.0_unigene60770 SustainPine v2.0 1409
• AutoFact: Elongation factor 1-delta n=1 Tax=Pimpinella brachycarpa RepID=EF1D_PIMBR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor 1-delta 1 0.0
Complete
sp_v2.0_unigene60903 SustainPine v2.0 1104
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor 1- 0.0
Complete
sp_v2.0_unigene61692 SustainPine v2.0 657
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor 1-delta 1 1.10338e-35
N-terminus
sp_v2.0_unigene62589 SustainPine v2.0 738
• AutoFact: Unassigned protein
unknown
sp_v2.0_unigene62608 SustainPine v2.0 380
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor 1-beta 4.90522e-31
C-terminus
sp_v2.0_unigene63646 SustainPine v2.0 510
• AutoFact: Translational elongation factor 1 subunit Bbeta n=1 Tax=Pisum sativum RepID=Q6SZ89_PEA 9.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor 1-delta 1 2.01862e-30
C-terminus
sp_v2.0_unigene64487 SustainPine v2.0 365
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor 1-beta 2.54007e-29
Putative N-terminus
sp_v2.0_unigene66320 SustainPine v2.0 343
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor 1-delta 1 5.65183e-37
N-terminus
sp_v2.0_unigene69167 SustainPine v2.0 457
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor 1-delta 1 0.0
N-terminus
sp_v2.0_unigene85097 SustainPine v2.0 309
• AutoFact: small subunit ribosomal protein S6 [Arabidopsis thaliana] dbj|BAB01802.1| unnamed protein product [Arabidopsis thaliana] gb|AAM67031.1| unknown [Arabidopsis thaliana] dbj|BAC42712.1| unknown protein [Arabidopsis thaliana] gb|AAO50729.1| unknown protein [A 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small subunit ribosomal protein s6 1.6909e-37
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain