Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, TFIIS-type

Term: IPR001222  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1537 SustainPine v2.0 1713
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases iii kda 0.0
Complete
sp_v2.0_unigene13995 SustainPine v2.0 1076
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa12 0.0
Complete
sp_v2.0_unigene15261 SustainPine v2.0 855
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 1.44089e-22
N-terminus
sp_v2.0_unigene15749 SustainPine v2.0 1780
AutoFact: putative elongation factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 0.0
Complete
sp_v2.0_unigene17855 SustainPine v2.0 702
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 2.0e-20
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polymerase iii (dna directed) polypeptide kda 1.56224e-25
C-terminus
sp_v2.0_unigene19815 SustainPine v2.0 1182
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa12 0.0
Complete
sp_v2.0_unigene21438 SustainPine v2.0 1225
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
Complete
sp_v2.0_unigene62523 SustainPine v2.0 699
AutoFact: Transcription elongation factor s-II, putative n=1 Tax=Ricinus communis RepID=B9SRT6_RICCO 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 0.0
N-terminus
sp_v2.0_unigene63119 SustainPine v2.0 480
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 3.0e-30
FL-Next: sp=DNA-directed RNA polymerase subunit; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa12 1.65147e-38
Putative Complete
sp_v2.0_unigene77374 SustainPine v2.0 400
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 9.0e-39
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polymerase iii (dna directed) polypeptide kda 0.0
C-terminus
sp_v2.0_unigene77736 SustainPine v2.0 466
AutoFact: putative elongation factor [Arabidopsis thaliana] 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 2.86401e-30
N-terminus
sp_v2.0_unigene78511 SustainPine v2.0 1034
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
Complete
sp_v2.0_unigene79035 SustainPine v2.0 470
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases iii kda 0.0
Putative Complete
sp_v2.0_unigene81190 SustainPine v2.0 588
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 9.0e-37
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
Putative Complete
sp_v2.0_unigene81551 SustainPine v2.0 329
AutoFact: DNA-directed RNA polymerase subunit n=3 Tax=Poaceae RepID=C5YPS4_SORBI 3.0e-14
FL-Next: sp=DNA-directed RNA polymerase subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 5.59538e-18
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain