Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribonuclease H domain

Term: IPR002156  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1639 SustainPine v2.0 1538
AutoFact: GEM-like 1 n=2 Tax=Vitis vinifera RepID=A7LH72_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glabra2 expression modulator 0.0
Complete
sp_v2.0_unigene8123 SustainPine v2.0 669
AutoFact: gag/pol polyprotein [Pisum sativum] 9.99995e-41
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100797050 0.0
Putative Complete
sp_v2.0_unigene9110 SustainPine v2.0 1466
AutoFact: equilibrative nucleoside transporter 6 [Arabidopsis thaliana] gb|AAL25098.1|AF426402_1 putative equilibrative nucleoside transporter ENT6 [Arabidopsis thaliana] gb|AEE82480.1| equilibrative nucleoside transporter 6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: equilibrative nucleoside transporter 0.0
C-terminus
sp_v2.0_unigene9606 SustainPine v2.0 769
AutoFact: Reverse transcriptase family protein n=1 Tax=Asparagus officinalis RepID=Q2AA48_ASPOF 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna-directed dna polymerase (reverse transcriptase) ribonuclease h 1.79017e-23
Internal
sp_v2.0_unigene11386 SustainPine v2.0 1042
AutoFact: RNase H domain-containing protein n=1 Tax=Brassica oleracea RepID=B2D2H0_BRAOL 2.0e-35
FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
Blast2go: rnase h domain-containing protein 1.14251e-36
Complete
sp_v2.0_unigene11948 SustainPine v2.0 619
AutoFact: Brushy protein, putative n=1 Tax=Ricinus communis RepID=B9RTZ8_RICCO 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein brushy 1.4013e-45
N-terminus
sp_v2.0_unigene12032 SustainPine v2.0 377
AutoFact: GRAM domain containing protein 9.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene12039 SustainPine v2.0 1857
AutoFact: GTP-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RI48_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding protein 0.0
Putative Complete
sp_v2.0_unigene12129 SustainPine v2.0 1202
AutoFact: [R] COG0457 FOG: TPR repeat 5.0e-10
FL-Next: sp=Protein TONSOKU; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein brushy 0.0
N-terminus
sp_v2.0_unigene12308 SustainPine v2.0 524
AutoFact: putative nucleoside transporter, ENT2 [Arabidopsis thaliana] gb|AAF04424.1|AC010927_17 hypothetical protein [Arabidopsis thaliana] gb|AEE74845.1| putative nucleoside transporter, ENT2 [Arabidopsis thaliana] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: equilibrative nucleoside transporter 0.0
N-terminus
sp_v2.0_unigene12400 SustainPine v2.0 828
AutoFact: ribosomal protein L16a [Coprinopsis cinerea okayama7#130] gb|EAU93058.1| ribosomal protein L16a [Coprinopsis cinerea okayama7#130] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l13a 0.0
Complete
sp_v2.0_unigene15256 SustainPine v2.0 748
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QTQ7_ORYSJ 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
N-terminus
sp_v2.0_unigene16958 SustainPine v2.0 745
AutoFact: GEM-like protein 5 [Arabidopsis thaliana] sp|Q9LYV6.1|GEML5_ARATH RecName: Full=GEM-like protein 5 emb|CAB86627.1| ABA-responsive protein-like [Arabidopsis thaliana] gb|AAR20771.1| At5g13200 [Arabidopsis thaliana] gb|AAS92344.1| At5g13200 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene17904 SustainPine v2.0 813
AutoFact: putative nucleoside transporter, ENT2 [Arabidopsis thaliana] gb|AAF04424.1|AC010927_17 hypothetical protein [Arabidopsis thaliana] gb|AEE74845.1| putative nucleoside transporter, ENT2 [Arabidopsis thaliana] 0.0001
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: equilibrative nucleoside transporter 4 2.28494e-07
Putative C-terminus
sp_v2.0_unigene20139 SustainPine v2.0 277
AutoFact: NXRV123_F01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV123_F01 5' similar to Arabidopsis thaliana sequence At2g15410 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100249206 9.7425e-24
Putative N-terminus
sp_v2.0_unigene20140 SustainPine v2.0 2232
AutoFact: BTB and TAZ domain protein 4 [Arabidopsis thaliana] gb|AED98350.1| BTB and TAZ domain protein 4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: btb poz and taz domain-containing protein 4-like 0.0
Complete
sp_v2.0_unigene21188 SustainPine v2.0 398
AutoFact: DNA-directed RNA polymerase (Fragment) n=10 Tax=Spermatophyta RepID=Q2TUN6_GINBI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii largest subunit 0.0
Internal
sp_v2.0_unigene23541 SustainPine v2.0 1151
AutoFact: GEM-like protein 5 [Arabidopsis thaliana] sp|Q9LYV6.1|GEML5_ARATH RecName: Full=GEM-like protein 5 emb|CAB86627.1| ABA-responsive protein-like [Arabidopsis thaliana] gb|AAR20771.1| At5g13200 [Arabidopsis thaliana] gb|AAS92344.1| At5g13200 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene26619 SustainPine v2.0 719
AutoFact: GEM-like protein 5 [Arabidopsis thaliana] sp|Q9LYV6.1|GEML5_ARATH RecName: Full=GEM-like protein 5 emb|CAB86627.1| ABA-responsive protein-like [Arabidopsis thaliana] gb|AAR20771.1| At5g13200 [Arabidopsis thaliana] gb|AAS92344.1| At5g13200 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gem-like protein 5 0.0
C-terminus
sp_v2.0_unigene26804 SustainPine v2.0 487
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 0.0
FL-Next: tr=Putative uncharacterized protein; Beta vulgaris subsp. vulgaris. 0.0
Blast2go: reverse transcriptase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain