Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA polymerase Rpb1, domain 4

Term: IPR007083  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene57924 SustainPine v2.0 316
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q2TUP3_9CONI 2.0e-29
FL-Next: sp=DNA-directed RNA polymerase; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: rna polymerase i largest subunit 1.00325e-34
Internal
sp_v2.0_unigene62563 SustainPine v2.0 407
AutoFact: PREDICTED: similar to cAMP response element-binding protein 5 n=1 Tax=Hydra magnipapillata RepID=UPI0001925AA1 2.0e-07
Blast2go: camp response element-binding protein 5 5.12823e-09
Coding
sp_v2.0_unigene64101 SustainPine v2.0 385
AutoFact: DNA-directed RNA polymerase n=3 Tax=Magnoliophyta RepID=B9FZ51_ORYSJ 1.0e-28
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase 9.81047e-35
Internal
sp_v2.0_unigene77494 SustainPine v2.0 518
AutoFact: PREDICTED: similar to cAMP response element-binding protein 5 n=1 Tax=Hydra magnipapillata RepID=UPI0001925AA1 2.0e-07
Blast2go: camp response element-binding protein 5 1.28271e-08
Coding
sp_v2.0_unigene78748 SustainPine v2.0 767
AutoFact: Herpes_BLLF1 multi-domain protein 9.0e-15
Coding
sp_v2.0_unigene87806 SustainPine v2.0 261
AutoFact: DNA-directed RNA polymerase n=3 Tax=Magnoliophyta RepID=B9FZ51_ORYSJ 2.0e-23
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase 1.18612e-29
Internal
sp_v2.0_unigene88434 SustainPine v2.0 892
AutoFact: Herpes_BLLF1 multi-domain protein 7.0e-24
FL-Next: sp=DNA-directed RNA polymerase; Blastocystis hominis. 0.0
Blast2go: salivary glue protein sgs-4 1.16479e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain