Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Predicted AT-hook DNA-binding

Term: IPR014476  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene6734 SustainPine v2.0 1580
AutoFact: AT-hook DNA-binding protein [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene9791 SustainPine v2.0 951
AutoFact: DUF296 domain containing protein 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 0.0
C-terminus
sp_v2.0_unigene11053 SustainPine v2.0 948
AutoFact: DUF296 domain containing protein 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 7.31837e-29
C-terminus
sp_v2.0_unigene14483 SustainPine v2.0 1418
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJW1_RICCO 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 0.0
C-terminus
sp_v2.0_unigene14843 SustainPine v2.0 1204
AutoFact: AT-hook DNA-binding protein (Fragment) n=1 Tax=Catharanthus roseus RepID=A1DR79_CATRO 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene18752 SustainPine v2.0 875
AutoFact: DUF296 multi-domain protein 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna-binding protein escarola-like 1.62791e-09
C-terminus
sp_v2.0_unigene19569 SustainPine v2.0 1911
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.55616e-34
Putative Complete
sp_v2.0_unigene22345 SustainPine v2.0 2129
AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 8.40779e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at hook motif dna-binding family protein 0.0
Complete
sp_v2.0_unigene27252 SustainPine v2.0 895
AutoFact: ESC, putative n=1 Tax=Ricinus communis RepID=B9RDE5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 0.0
Complete
sp_v2.0_unigene34114 SustainPine v2.0 630
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 1.01081e-28
C-terminus
sp_v2.0_unigene46515 SustainPine v2.0 572
AutoFact: DNA binding protein n=1 Tax=Zea mays RepID=B6SJB5_MAIZE 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 4.1044e-38
Putative N-terminus
sp_v2.0_unigene60726 SustainPine v2.0 620
AutoFact: DUF296 multi-domain protein 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 0.0
Putative C-terminus
sp_v2.0_unigene60876 SustainPine v2.0 568
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9STJ6_RICCO 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 7.37579e-30
Putative C-terminus
sp_v2.0_unigene85356 SustainPine v2.0 1088
AutoFact: AT-hook DNA-binding protein [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain