Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: DNA mismatch repair protein MutS-homologue MSH6

Term: IPR015536  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1894 SustainPine v2.0 3318
AutoFact: DNA mismatch repair protein MSH2, putative n=1 Tax=Ricinus communis RepID=B9RE38_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh2 0.0
Complete
sp_v2.0_unigene2800 SustainPine v2.0 1631
AutoFact: DNA mismatch repair protein MSH6-2, putative n=1 Tax=Ricinus communis RepID=B9RKT8_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-2 0.0
C-terminus
sp_v2.0_unigene11987 SustainPine v2.0 2699
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna mismatch repair protein msh6-1 0.0
Putative Complete
sp_v2.0_unigene17446 SustainPine v2.0 925
AutoFact: Unassigned protein
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-2 3.60484e-16
Putative N-terminus
sp_v2.0_unigene40146 SustainPine v2.0 233
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNF5_RICCO 1.0e-16
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-1 8.3216e-20
Internal
sp_v2.0_unigene40473 SustainPine v2.0 761
AutoFact: DNA mismatch repair protein MSH6-2, putative n=1 Tax=Ricinus communis RepID=B9RKT8_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-2 0.0
Internal
sp_v2.0_unigene44416 SustainPine v2.0 234
AutoFact: MutS homolog 7 [Triticum aestivum] 4.0e-26
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-2 2.07809e-36
Internal
sp_v2.0_unigene74128 SustainPine v2.0 400
AutoFact: MutS homolog 7 [Triticum aestivum] 5.0e-20
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-2 1.47484e-24
Internal
sp_v2.0_unigene86127 SustainPine v2.0 703
AutoFact: Mismatch repair protein (Fragment) n=1 Tax=Solanum lycopersicum RepID=D6QY21_SOLLC 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-2 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain