Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Tudor domain

Term: IPR002999  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2800 SustainPine v2.0 1631
AutoFact: DNA mismatch repair protein MSH6-2, putative n=1 Tax=Ricinus communis RepID=B9RKT8_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-2 0.0
C-terminus
sp_v2.0_unigene4978 SustainPine v2.0 889
AutoFact: Survival of motor neuron-related-splicing factor 30 n=4 Tax=Arabidopsis RepID=F4IR82_ARATH 8.99634e-43
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: survival of motor neuron-related-splicing factor 30 0.0
N-terminus
sp_v2.0_unigene6780 SustainPine v2.0 1175
AutoFact: Enhancer of polycomb-like transcription factor protein [Arabidopsis thaliana] emb|CAB86009.1| putative protein [Arabidopsis thaliana] gb|AED90770.1| Enhancer of polycomb-like transcription factor protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: enhancer of polycomb-like transcription factor protein 0.0
Internal
sp_v2.0_unigene9587 SustainPine v2.0 1255
AutoFact: survival of motor neuron-related-splicing factor 30 [Arabidopsis thaliana] ref|NP_849927.1| survival of motor neuron-related-splicing factor 30 [Arabidopsis thaliana] ref|NP_001077871.1| survival of motor neuron-related-splicing factor 30 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: survival of motor neuron-related-splicing factor 30 0.0
Putative Complete
sp_v2.0_unigene11987 SustainPine v2.0 2699
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna mismatch repair protein msh6-1 0.0
Putative Complete
sp_v2.0_unigene27690 SustainPine v2.0 315
AutoFact: survival of motor neuron-related-splicing factor 30 [Arabidopsis thaliana] gb|AEC05599.1| survival of motor neuron-related-splicing factor 30 [Arabidopsis thaliana] 1.0e-05
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: survival motor neuron 1.5982e-08
C-terminus
sp_v2.0_unigene28252 SustainPine v2.0 1124
AutoFact: survival of motor neuron-related-splicing factor 30 [Arabidopsis thaliana] ref|NP_849927.1| survival of motor neuron-related-splicing factor 30 [Arabidopsis thaliana] ref|NP_001077871.1| survival of motor neuron-related-splicing factor 30 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: survival of motor neuron-related-splicing factor 30 0.0
Putative Complete
sp_v2.0_unigene63644 SustainPine v2.0 465
AutoFact: TUDOR protein with multiple SNc domains n=2 Tax=Picea RepID=Q0JRI3_PICAB 2.0e-29
FL-Next: tr=TUDOR protein with multiple SNc domains; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: rna binding protein rp120 9.55801e-32
N-terminus
sp_v2.0_unigene65633 SustainPine v2.0 454
AutoFact: TUDOR protein with multiple SNc domains n=2 Tax=Picea RepID=Q0JRI3_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein rp120 0.0
Internal
sp_v2.0_unigene78947 SustainPine v2.0 407
AutoFact: TUDOR protein with multiple SNc domains n=2 Tax=Picea RepID=Q0JRI3_PICAB 6.0e-09
FL-Next: tr=TUDOR protein with multiple SNc domains; Picea abies (Norway spruce) (Picea excelsa). 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain