Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Signal recognition particle, SRP54 subunit, helical bundle

Term: IPR013822  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1200 SustainPine v2.0 2061
AutoFact: signal recognition particle subunit [Arabidopsis thaliana] sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic; Short=54 chloroplast protein; Short=54CP; Short=SRP54; AltName: Full=FFC; Flags: Precursor emb|CAA7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: signal recognition particle 54 kda chloroplastic-like 0.0
Complete
sp_v2.0_unigene1829 SustainPine v2.0 2181
AutoFact: Signal recognition particle 54 kDa protein 2 n=11 Tax=Magnoliophyta RepID=SR542_SOLLC 0.0
FL-Next: sp=Signal recognition particle 54 kDa protein 2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: signal recognition particle 54 kda protein 3 0.0
Complete
sp_v2.0_unigene5705 SustainPine v2.0 276
AutoFact: Os01g0958100 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0JFW3_ORYSJ 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fused signal recognition particle receptor 2.54994e-41
N-terminus
sp_v2.0_unigene8161 SustainPine v2.0 2387
AutoFact: signal recognition particle receptor subunit alpha [Arabidopsis thaliana] emb|CAB79778.1| signal recognition particle receptor-like protein [Arabidopsis thaliana] gb|AAL57699.1| AT4g30600/F17I23_60 [Arabidopsis thaliana] gb|AAM91442.1| AT4g30600/F17I23_60 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: signal recognition particle receptor subunit alpha 0.0
Complete
sp_v2.0_unigene10075 SustainPine v2.0 375
AutoFact: Cell division protein ftsy, putative n=1 Tax=Ricinus communis RepID=B9RDL9_RICCO 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast srp receptor cp precursor 3.12559e-18
C-terminus
sp_v2.0_unigene29309 SustainPine v2.0 539
AutoFact: chloroplast srp54 receptor1 [Zea mays] emb|CAD70570.1| chloroplast SRP receptor cpFtsY precursor [Zea mays] gb|ACR34281.1| unknown [Zea mays] 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: signal recognition 54 kda protein 3.93765e-43
Putative Complete
sp_v2.0_unigene69386 SustainPine v2.0 394
AutoFact: chloroplast srp54 receptor1 [Zea mays] emb|CAD70570.1| chloroplast SRP receptor cpFtsY precursor [Zea mays] gb|ACR34281.1| unknown [Zea mays] 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene80797 SustainPine v2.0 405
AutoFact: Signal recognition particle receptor alpha subunit, putative n=1 Tax=Ricinus communis RepID=B9STS5_RICCO 4.0e-35
FL-Next: tr=Signal recognition particle receptor alpha subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: signal recognition particle receptor subunit alpha 6.65701e-41
Internal
sp_v2.0_unigene91416 SustainPine v2.0 756
AutoFact: pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-oxoacid-dependent dioxygenase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain