Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Coatomer, WD associated region

Term: IPR006692  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene804 SustainPine v2.0 4778
AutoFact: coatomer subunit alpha-1 [Arabidopsis thaliana] sp|Q94A40.2|COPA1_ARATH RecName: Full=Coatomer subunit alpha-1; AltName: Full=Alpha-coat protein 1; Short=Alpha-COP 1 gb|AAC28519.1| Strong similarity to coatamer alpha subunit (HEPCOP) homolog gb|U24105 fro 0.0
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v2.0_unigene6461 SustainPine v2.0 1904
AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha 0.0
C-terminus
sp_v2.0_unigene6498 SustainPine v2.0 4414
AutoFact: coatomer subunit beta'-2 [Arabidopsis thaliana] sp|Q9C827.1|COB22_ARATH RecName: Full=Coatomer subunit beta'-2; AltName: Full=Beta'-coat protein 2; Short=Beta'-COP 2 gb|AAG51545.1|AC037424_10 coatomer complex subunit, putative; 33791-27676 [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene6858 SustainPine v2.0 1049
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 0.0
FL-Next: sp=Coatomer subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha 0.0
Internal
sp_v2.0_unigene21083 SustainPine v2.0 3746
AutoFact: coatomer complex subunit [Brachypodium sylvaticum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta -3 0.0
Complete
sp_v2.0_unigene26040 SustainPine v2.0 2385
AutoFact: coatomer subunit beta'-2 [Arabidopsis thaliana] sp|Q9C827.1|COB22_ARATH RecName: Full=Coatomer subunit beta'-2; AltName: Full=Beta'-coat protein 2; Short=Beta'-COP 2 gb|AAG51545.1|AC037424_10 coatomer complex subunit, putative; 33791-27676 [Arabidopsis th 0.0
FL-Next: sp=Coatomer subunit beta'-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer subunit beta -3 0.0
C-terminus
sp_v2.0_unigene26897 SustainPine v2.0 2228
AutoFact: coatomer subunit alpha-1 [Arabidopsis thaliana] sp|Q94A40.2|COPA1_ARATH RecName: Full=Coatomer subunit alpha-1; AltName: Full=Alpha-coat protein 1; Short=Alpha-COP 1 gb|AAC28519.1| Strong similarity to coatamer alpha subunit (HEPCOP) homolog gb|U24105 fro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer alpha 0.0
C-terminus
sp_v2.0_unigene31275 SustainPine v2.0 383
AutoFact: Coatomer alpha subunit, putative n=1 Tax=Ricinus communis RepID=B9SU35_RICCO 8.0e-13
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: coatomer alpha 1.56228e-12
Putative N-terminus
sp_v2.0_unigene32327 SustainPine v2.0 723
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 9.99995e-41
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene62420 SustainPine v2.0 1051
AutoFact: Coatomer alpha subunit-like protein n=2 Tax=Lotus japonicus RepID=Q70I39_LOTJA 9.0e-24
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha subunit 1.40673e-26
C-terminus
sp_v2.0_unigene63752 SustainPine v2.0 487
AutoFact: Coatomer alpha subunit-like protein n=2 Tax=Lotus japonicus RepID=Q70I39_LOTJA 4.0e-20
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer subunit alpha-1-like 1.4863e-24
Internal
sp_v2.0_unigene63784 SustainPine v2.0 571
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene69149 SustainPine v2.0 415
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 7.0e-10
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: coatomer alpha expressed 4.09083e-11
Internal
sp_v2.0_unigene71152 SustainPine v2.0 344
AutoFact: RecName: Full=Coatomer subunit alpha-2; AltName: Full=Alpha-coat protein 2; Short=Alpha-COP 2 gb|AAK18837.1|AC082645_7 putative alpha-coat protein [Oryza sativa Japonica Group] gb|ABF98514.1| Coatomer alpha subunit, putative, expressed [Oryza sativa Japon 9.99995e-41
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 3.54529e-43
Internal
sp_v2.0_unigene77476 SustainPine v2.0 355
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene79257 SustainPine v2.0 195
AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 9.0e-10
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha 1.10209e-19
Internal
sp_v2.0_unigene81206 SustainPine v2.0 755
AutoFact: coatomer subunit beta'-2 [Arabidopsis thaliana] sp|Q9C827.1|COB22_ARATH RecName: Full=Coatomer subunit beta'-2; AltName: Full=Beta'-coat protein 2; Short=Beta'-COP 2 gb|AAG51545.1|AC037424_10 coatomer complex subunit, putative; 33791-27676 [Arabidopsis th 0.0
FL-Next: sp=Coatomer subunit beta'-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer subunit beta -2-like 0.0
Putative C-terminus
sp_v2.0_unigene81329 SustainPine v2.0 817
AutoFact: RecName: Full=Coatomer subunit beta'-2; AltName: Full=Beta'-coat protein 2; Short=Beta'-COP 2 dbj|BAD25014.1| putative coatomer protein complex, subunit beta 2 (beta prime) [Oryza sativa Japonica Group] 2.0e-24
FL-Next: sp=Coatomer subunit beta'-2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: coatomer subunit beta -2-like 6.06484e-31
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain