Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribonuclease CAF1

Term: IPR006941  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2049 SustainPine v2.0 1906
AutoFact: Tryptophan biosynthesis protein, trpc, putative n=1 Tax=Ricinus communis RepID=B9T1U0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: indole-3-glycerol phosphate synthase 0.0
Complete
sp_v2.0_unigene6840 SustainPine v2.0 1634
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccr4-associated factor 0.0
Complete
sp_v2.0_unigene9091 SustainPine v2.0 1787
AutoFact: reticulon-like protein B8 [Arabidopsis thaliana] ref|NP_850551.1| reticulon-like protein B8 [Arabidopsis thaliana] sp|Q9SS37.1|RTNLH_ARATH RecName: Full=Reticulon-like protein B8; Short=AtRTNLB8 gb|AAF02816.1|AC009400_12 unknown protein [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b8 0.0
Complete
sp_v2.0_unigene15601 SustainPine v2.0 2044
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable ccr4-associated factor 1 homolog 7-like 0.0
Complete
sp_v2.0_unigene16009 SustainPine v2.0 1553
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease caf1 0.0
Complete
sp_v2.0_unigene18838 SustainPine v2.0 1492
AutoFact: polyA specific ribonuclease [Arabidopsis thaliana] 0.0
FL-Next: Isoform 3 of Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana GN=PARN 0.0
Blast2go: poly -specific ribonuclease parn-like 0.0
C-terminus
sp_v2.0_unigene25561 SustainPine v2.0 909
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene33099 SustainPine v2.0 495
AutoFact: proton gradient regulation 3 [Arabidopsis thaliana] sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850, chloroplastic; AltName: Full=Protein PROTON GRADIENT REGULATION 3; Flags: Precursor emb|CAB40755.1| putative p 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.43183e-24
Internal
sp_v2.0_unigene33664 SustainPine v2.0 519
AutoFact: indole-3-glycerol phosphate synthase [Arabidopsis thaliana] gb|AED95636.1| indole-3-glycerol phosphate synthase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: indole-3-glycerol phosphate synthase 0.0
Internal
sp_v2.0_unigene37371 SustainPine v2.0 579
AutoFact: Poly(A)-specific ribonuclease PARN [Arabidopsis thaliana] sp|Q9LG26.2|PARN_ARATH RecName: Full=Poly(A)-specific ribonuclease PARN; AltName: Full=Polyadenylate-specific ribonuclease; Short=AtPARN; AltName: Full=Protein ABA hypersensitive germination 2 dbj| 2.0e-37
FL-Next: sp=Poly(A)-specific ribonuclease PARN; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: poly -specific ribonuclease parn-like 0.0
N-terminus
sp_v2.0_unigene40525 SustainPine v2.0 392
AutoFact: proton gradient regulation 3 [Arabidopsis thaliana] sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850, chloroplastic; AltName: Full=Protein PROTON GRADIENT REGULATION 3; Flags: Precursor emb|CAB40755.1| putative p 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.46101e-33
Internal
sp_v2.0_unigene62824 SustainPine v2.0 683
AutoFact: putative CCR4-associated factor 1-6 [Arabidopsis thaliana] ref|NP_849915.1| putative CCR4-associated factor 1-6 [Arabidopsis thaliana] sp|Q9SAI2.1|CAF1F_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 6 gb|AAF14666.1|AC011713_14 Similar to g 5.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccr4-associated factor 1-6 2.29419e-24
N-terminus
sp_v2.0_unigene80880 SustainPine v2.0 512
AutoFact: indole-3-glycerol phosphate synthase [Arabidopsis thaliana] gb|AED95636.1| indole-3-glycerol phosphate synthase [Arabidopsis thaliana] 7.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: indole-3-glycerol phosphate synthase 3.5649e-29
Internal
sp_v2.0_unigene81357 SustainPine v2.0 926
AutoFact: Reticulon domain containing protein 9.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 24 kda seed maturation protein 0.0
N-terminus
sp_v2.0_unigene81885 SustainPine v2.0 783
AutoFact: reticulon-like protein B1 [Arabidopsis thaliana] sp|Q9SUR3.1|RTNLA_ARATH RecName: Full=Reticulon-like protein B1; Short=AtRTNLB1; AltName: Full=VirB2-interacting protein 1 emb|CAA23029.1| putative protein [Arabidopsis thaliana] emb|CAB79318.1| putative pr 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 24 kda seed maturation protein 0.0
N-terminus
sp_v2.0_unigene85975 SustainPine v2.0 448
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease caf1 0.0
C-terminus
sp_v2.0_unigene91230 SustainPine v2.0 760
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SV48_VITVI 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Misassembled

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain