Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Translation elongation factor EF1A, eukaryotic/archaeal

Term: IPR004539  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene12642 SustainPine v2.0 519
AutoFact: Elongation factor 1-alpha n=178 Tax=Eukaryota RepID=EF1A_PIRIN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1-alpha 0.0
C-terminus
sp_v2.0_unigene15917 SustainPine v2.0 957
AutoFact: Elongation factor 1-alpha n=1 Tax=Arabidopsis thaliana RepID=F4HUA0_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1-alpha 0.0
N-terminus
sp_v2.0_unigene16463 SustainPine v2.0 2449
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1- 0.0
Complete
sp_v2.0_unigene24406 SustainPine v2.0 507
AutoFact: Putative elongation factor 1A (Fragment) n=1 Tax=Cupressus sempervirens RepID=B1PID4_9CONI 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translation elongation factor-1 alpha 5.95712e-35
Putative Complete
sp_v2.0_unigene24441 SustainPine v2.0 406
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translation elongation factor-1 alpha 0.0
Putative Complete
sp_v2.0_unigene24861 SustainPine v2.0 1847
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1- 0.0
Complete
sp_v2.0_unigene38329 SustainPine v2.0 338
AutoFact: Translation elongation factor 1-alpha (Fragment) n=1 Tax=Tremellodendron sp. PBM2324 RepID=Q4TVZ0_9HOMO 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translation elongation factor 1-alpha 0.0
Internal
sp_v2.0_unigene50697 SustainPine v2.0 461
AutoFact: Elongation factor 1 alpha n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HRH1_AJECH 6.0e-40
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1-alpha 4.88128e-41
C-terminus
sp_v2.0_unigene50761 SustainPine v2.0 301
AutoFact: Elongation factor 1 alpha (Fragment) n=3 Tax=Eukaryota RepID=A7J577_9LECA 1.99993e-41
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1-alpha 0.0
Internal
sp_v2.0_unigene61768 SustainPine v2.0 998
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1- 0.0
N-terminus
sp_v2.0_unigene78338 SustainPine v2.0 322
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translation elongation factor-1 alpha 0.0
Putative N-terminus
sp_v2.0_unigene79992 SustainPine v2.0 1101
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1-alpha 0.0
N-terminus
sp_v2.0_unigene80440 SustainPine v2.0 583
AutoFact: elongation factor 1 alpha [Saccharum hybrid cultivar CP65-357] 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: elongation factor 1- expressed 0.0
Complete
sp_v2.0_unigene81508 SustainPine v2.0 572
AutoFact: elongation factor 1-alpha [Chara australis] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1-alpha 0.0
Putative Complete
sp_v2.0_unigene82423 SustainPine v2.0 327
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translation elongation factor-1 alpha 7.88639e-30
C-terminus
sp_v2.0_unigene82844 SustainPine v2.0 564
AutoFact: Putative elongation factor 1-alpha (Fragment) n=1 Tax=Prunus dulcis RepID=A7Y7K1_PRUDU 7.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translation elongation factor-1 alpha 1.54254e-40
Putative N-terminus
sp_v2.0_unigene82885 SustainPine v2.0 360
AutoFact: translation elongation factor-1 alpha [Picea abies] 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translation elongation factor-1 alpha 0.0
Putative C-terminus
sp_v2.0_unigene82928 SustainPine v2.0 750
AutoFact: elongation factor 1 alpha [Saccharum hybrid cultivar CP65-357] 5.00264e-43
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: elongation factor 1- expressed 0.0
Complete
sp_v2.0_unigene82962 SustainPine v2.0 531
AutoFact: elongation factor 1 alpha [Saccharum hybrid cultivar CP65-357] 1.99965e-42
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1- expressed 0.0
N-terminus
sp_v2.0_unigene82979 SustainPine v2.0 810
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1- 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain