Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Helix-turn-helix motif

Term: IPR000047  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene61005 SustainPine v2.0 1077
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hd domain class transcription factor 0.0
Putative Complete
sp_v2.0_unigene63134 SustainPine v2.0 822
AutoFact: Homeodomain protein HB2 n=1 Tax=Picea abies RepID=Q8S555_PICAB 3.0e-37
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein anthocyaninless 2 9.64514e-42
Putative Complete
sp_v2.0_unigene63385 SustainPine v2.0 437
AutoFact: homeobox 1 [Picea abies] 5.0e-16
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2 7.57817e-19
C-terminus
sp_v2.0_unigene77675 SustainPine v2.0 342
AutoFact: pfam00046, Homeobox, Homeobox domain 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.46913e-17
Putative N-terminus
sp_v2.0_unigene78674 SustainPine v2.0 356
AutoFact: Homeodomain leucine-zipper 1 n=1 Tax=Nicotiana benthamiana RepID=C6FFS4_NICBE 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.17759e-23
Putative C-terminus
sp_v2.0_unigene79662 SustainPine v2.0 565
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9SX72_RICCO 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.17973e-42
Internal
sp_v2.0_unigene90331 SustainPine v2.0 269
AutoFact: Homeobox-leucine zipper protein HOX1 n=3 Tax=Oryza sativa RepID=HOX1_ORYSJ 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hox27 2.7665e-20
Internal
sp_v2.0_unigene92438 SustainPine v2.0 1549
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hd domain class transcription factor 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain