Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Domain of unknown function DUF1747

Term: IPR013719  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene362 SustainPine v2.0 1190
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit 0.0
C-terminus
sp_v2.0_unigene696 SustainPine v2.0 2817
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit 0.0
Putative Complete
sp_v2.0_unigene6674 SustainPine v2.0 750
AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit ssrp1 1.27339e-34
Putative Complete
sp_v2.0_unigene7249 SustainPine v2.0 612
AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit ssrp1 4.50652e-37
Putative C-terminus
sp_v2.0_unigene13704 SustainPine v2.0 475
AutoFact: Global transcription factor group (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I6M9_POPTR 0.0
FL-Next: sp=FACT complex subunit SPT16; Zea mays (Maize). 0.0
Blast2go: global transcription factor group 0.0
Internal
sp_v2.0_unigene38695 SustainPine v2.0 373
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 2.0e-36
FL-Next: sp=FACT complex subunit SPT16; Zea mays (Maize). 0.0
Blast2go: global transcription factor group 3.2328e-42
Internal
sp_v2.0_unigene39037 SustainPine v2.0 468
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit 0.0
Internal
sp_v2.0_unigene46086 SustainPine v2.0 476
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 3.0e-17
FL-Next: sp=FACT complex subunit SPT16; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: fact complex subunit spt16-like 5.57956e-17
Internal
sp_v2.0_unigene47680 SustainPine v2.0 486
AutoFact: FACT complex subunit SPT16 [Zea mays] sp|Q8H6B1.1|SPT16_MAIZE RecName: Full=FACT complex subunit SPT16; AltName: Full=Facilitates chromatin transcription complex subunit SPT16; AltName: Full=Global transcription factor group C protein 102 gb|AAN41252.1| g 2.0e-23
FL-Next: sp=FACT complex subunit SPT16; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: fact complex subunit spt16-like 2.0048e-30
N-terminus
sp_v2.0_unigene48526 SustainPine v2.0 383
AutoFact: FACT complex subunit SPT16 n=2 Tax=Andropogoneae RepID=SPT16_MAIZE 7.0e-24
FL-Next: sp=FACT complex subunit SPT16; Zea mays (Maize). 0.0
Blast2go: fact complex subunit spt16-like 1.81772e-27
N-terminus
sp_v2.0_unigene48868 SustainPine v2.0 240
AutoFact: Global transcription factor group (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I6M9_POPTR 9.0e-21
FL-Next: sp=FACT complex subunit SPT16; Zea mays (Maize). 0.0
Blast2go: at4g10710-like protein 1.24166e-24
Internal
sp_v2.0_unigene57700 SustainPine v2.0 224
AutoFact: FACT complex subunit SPT16, putative n=1 Tax=Ricinus communis RepID=B9RFP6_RICCO 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit 2.80208e-20
Internal
sp_v2.0_unigene64507 SustainPine v2.0 458
AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit ssrp1 5.9259e-25
Internal
sp_v2.0_unigene77995 SustainPine v2.0 223
AutoFact: Nop14 domain containing protein 6.0e-05
Coding
sp_v2.0_unigene83772 SustainPine v2.0 403
AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 1.0e-32
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: eukaryotic translation initiation factor 5a 1.37065e-34
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain