Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: BSD

Term: IPR005607  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene703 SustainPine v2.0 852
AutoFact: Protein binding protein, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9T4R7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: btb poz domain-containing protein 0.0
C-terminus
sp_v2.0_unigene1377 SustainPine v2.0 1516
AutoFact: BTB/POZ domain-containing protein [Arabidopsis thaliana] ref|NP_001077574.1| BTB/POZ domain-containing protein [Arabidopsis thaliana] sp|Q9XHZ8.1|Y1178_ARATH RecName: Full=BTB/POZ domain-containing protein At1g21780 gb|AAD41432.1|AC007727_21 Contains simi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: btb poz domain-containing protein 0.0
Complete
sp_v2.0_unigene4006 SustainPine v2.0 1925
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.71538e-38
Complete
sp_v2.0_unigene5321 SustainPine v2.0 1998
AutoFact: BSD domain-containing protein [Arabidopsis thaliana] dbj|BAB11138.1| unnamed protein product [Arabidopsis thaliana] gb|AAK59438.1| unknown protein [Arabidopsis thaliana] gb|AAM44972.1| unknown protein [Arabidopsis thaliana] gb|AED98122.1| BSD domain-conta 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bsd domain-containing protein 0.0
C-terminus
sp_v2.0_unigene9802 SustainPine v2.0 2557
AutoFact: PREDICTED: similar to BSD domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI000198335A 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: bsd domain-containing protein 0.0
Complete
sp_v2.0_unigene12869 SustainPine v2.0 969
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein 0.0
Internal
sp_v2.0_unigene14480 SustainPine v2.0 1846
AutoFact: BSD domain-containing protein [Arabidopsis thaliana] dbj|BAB11138.1| unnamed protein product [Arabidopsis thaliana] gb|AAK59438.1| unknown protein [Arabidopsis thaliana] gb|AAM44972.1| unknown protein [Arabidopsis thaliana] gb|AED98122.1| BSD domain-conta 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bsd domain containing protein 0.0
Complete
sp_v2.0_unigene16056 SustainPine v2.0 795
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 4.06377e-44
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 0.0
Complete
sp_v2.0_unigene18371 SustainPine v2.0 538
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 2.0e-35
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.4013e-45
C-terminus
sp_v2.0_unigene22137 SustainPine v2.0 1720
AutoFact: BSD domain-containing protein [Arabidopsis thaliana] gb|AAK96502.1| At1g26300/F28B23_4 [Arabidopsis thaliana] gb|AAM98113.1| At1g26300/F28B23_4 [Arabidopsis thaliana] dbj|BAD43006.1| unnamed protein product [Arabidopsis thaliana] dbj|BAD44463.1| unnamed p 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene22446 SustainPine v2.0 397
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100805729 6.71351e-33
Internal
sp_v2.0_unigene23037 SustainPine v2.0 908
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 1.00053e-42
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone 2 0.0
Putative Complete
sp_v2.0_unigene24015 SustainPine v2.0 850
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 3.00004e-41
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a variant 1 0.0
Complete
sp_v2.0_unigene24030 SustainPine v2.0 818
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 4.00001e-41
FL-Next: sp=Histone H2A; Vitis vinifera (Grape). 0.0
Blast2go: histone h2a variant 1 0.0
Complete
sp_v2.0_unigene24193 SustainPine v2.0 566
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 8.00001e-42
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a variant 0.0
Putative Complete
sp_v2.0_unigene25385 SustainPine v2.0 846
AutoFact: Histone H2A.6 n=6 Tax=Spermatophyta RepID=H2A6_ARATH 6.0e-36
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 5.01752e-37
Complete
sp_v2.0_unigene35237 SustainPine v2.0 700
AutoFact: transcription initiation factor TFIIH subunit H1 [Arabidopsis thaliana] sp|Q3ECP0.1|TFB1A_ARATH RecName: Full=Probable RNA polymerase II transcription factor B subunit 1-1; AltName: Full=General transcription and DNA repair factor IIH subunit TFB1-1; Shor 9.99995e-41
FL-Next: Isoform 3 of Probable RNA polymerase II transcription factor B subunit 1-3 OS=Arabidopsis thaliana GN=TFB1-3 0.0
Blast2go: transcription initiation factor tfiih subunit h1 0.0
C-terminus
sp_v2.0_unigene36986 SustainPine v2.0 368
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 1.0e-16
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 2.8668e-16
Putative N-terminus
sp_v2.0_unigene38069 SustainPine v2.0 517
AutoFact: transcription initiation factor TFIIH subunit H1 [Arabidopsis thaliana] sp|Q3ECP0.1|TFB1A_ARATH RecName: Full=Probable RNA polymerase II transcription factor B subunit 1-1; AltName: Full=General transcription and DNA repair factor IIH subunit TFB1-1; Shor 5.0e-27
FL-Next: sp=Probable RNA polymerase II transcription factor B subunit 1-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription initiation factor tfiih subunit h1 3.68483e-32
Internal
sp_v2.0_unigene43185 SustainPine v2.0 415
AutoFact: transcription initiation factor TFIIH subunit H1 [Arabidopsis thaliana] sp|Q3ECP0.1|TFB1A_ARATH RecName: Full=Probable RNA polymerase II transcription factor B subunit 1-1; AltName: Full=General transcription and DNA repair factor IIH subunit TFB1-1; Shor 1.0e-26
FL-Next: Isoform 2 of Probable RNA polymerase II transcription factor B subunit 1-3 OS=Arabidopsis thaliana GN=TFB1-3 0.0
Blast2go: transcription initiation factor tfiih subunit h1 1.22333e-42
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain