Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA-directed RNA polymerase, dimerisation

Term: IPR011261  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3028 SustainPine v2.0 1230
AutoFact: Trithorax, putative n=1 Tax=Ricinus communis RepID=B9RII0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase atx4-like 0.0
Putative Complete
sp_v2.0_unigene9204 SustainPine v2.0 980
AutoFact: histone-lysine N-methyltransferase ATX5 [Arabidopsis thaliana] sp|Q8GZ42.1|ATX5_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX5; AltName: Full=Protein SET DOMAIN GROUP 29; AltName: Full=Trithorax-homolog protein 5; Short=TRX-homolog protein 5 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase atx4-like 0.0
Putative Complete
sp_v2.0_unigene9429 SustainPine v2.0 1673
AutoFact: RNA polymerase, dimerisation [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase third largest subunit 0.0
Complete
sp_v2.0_unigene16078 SustainPine v2.0 1128
AutoFact: DNA-directed RNA polymerase III subunit C19 [Arabidopsis thaliana] ref|NP_001031443.1| DNA-directed RNA polymerase III subunit C19 [Arabidopsis thaliana] gb|AAC49453.1| RNA polymerase I(A) and III(C) 14 kDa subunit [Arabidopsis thaliana] gb|AAC49454.1| Ar 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases i and iii subunit rpac2 0.0
Complete
sp_v2.0_unigene17063 SustainPine v2.0 971
AutoFact: DNA-directed RNA polymerase II subunit J n=4 Tax=Poaceae RepID=B4FJS1_MAIZE 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene27853 SustainPine v2.0 1709
AutoFact: RNA polymerase I subunit 43 [Arabidopsis thaliana] gb|AAK62414.1|AF386969_1 RNA polymerase subunit (isoform B) [Arabidopsis thaliana] gb|AAB00529.1| RNA polymerase subunit [Arabidopsis thaliana] gb|AAB71974.1| RNA polymerase subunit (isoform B) [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna polymerase subunit 0.0
Complete
sp_v2.0_unigene37046 SustainPine v2.0 722
AutoFact: histone-lysine N-methyltransferase ATX1 [Arabidopsis thaliana] sp|Q9C5X4.2|ATX1_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX1; AltName: Full=Protein SET DOMAIN GROUP 27; AltName: Full=Trithorax-homolog protein 1; Short=TRX-homolog protein 1 0.0
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana GN=ATX1 0.0
Blast2go: histone-lysine n-methyltransferase atx2-like 0.0
Internal
sp_v2.0_unigene41003 SustainPine v2.0 389
AutoFact: DNA-directed RNA polymerase II, third largest subunit [Arabidopsis thaliana] 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase third largest subunit 1.11544e-28
C-terminus
sp_v2.0_unigene46101 SustainPine v2.0 481
AutoFact: SET domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IA87_POPTR 0.0
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana GN=ATX1 0.0
Blast2go: set domain protein 0.0
Internal
sp_v2.0_unigene60934 SustainPine v2.0 320
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.50386e-14
N-terminus
sp_v2.0_unigene61030 SustainPine v2.0 537
AutoFact: potential RNA Polymerase I and III shared subunit Rpc19 [Candida albicans SC5314] ref|XP_710695.1| potential RNA Polymerase I and III shared subunit Rpc19 [Candida albicans SC5314] gb|EAK91447.1| potential RNA Polymerase I and III shared subunit Rpc19 [Ca 8.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potential rna polymerase i and iii shared subunit rpc19 4.79633e-30
N-terminus
sp_v2.0_unigene76925 SustainPine v2.0 717
AutoFact: DNA-directed RNA polymerase II subunit RPB11 [Arabidopsis thaliana] sp|Q38859.1|RPB11_ARATH RecName: Full=DNA-directed RNA polymerase II subunit RPB11; Short=RNA polymerase II subunit B11; AltName: Full=DNA-directed RNA polymerase II 13.6 kDa polypeptide; 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain