Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Histone deacetylase

Term: IPR003084  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1009 SustainPine v2.0 1791
AutoFact: Histone deacetylase (Fragment) n=7 Tax=rosids RepID=D7SM47_VITVI 0.0
FL-Next: sp=Histone deacetylase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 0.0
Complete
sp_v2.0_unigene1881 SustainPine v2.0 1980
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Malpighiales RepID=B9IEX4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Complete
sp_v2.0_unigene6345 SustainPine v2.0 734
AutoFact: Histone deacetylase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TG19_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Internal
sp_v2.0_unigene21053 SustainPine v2.0 2102
AutoFact: Histone deacetylase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TG19_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Complete
sp_v2.0_unigene21075 SustainPine v2.0 2569
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Complete
sp_v2.0_unigene34269 SustainPine v2.0 392
AutoFact: histone deacetylase 6 [Arabidopsis thaliana] sp|Q9FML2.1|HDA6_ARATH RecName: Full=Histone deacetylase 6 dbj|BAB10553.1| histone deacetylase [Arabidopsis thaliana] gb|AAL60022.1| putative histone deacetylase [Arabidopsis thaliana] gb|AAM65853.1| histone de 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 2.50526e-22
Putative Complete
sp_v2.0_unigene34351 SustainPine v2.0 128
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v2.0_unigene79919 SustainPine v2.0 462
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 7.0e-36
FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 1.05097e-42
Internal
sp_v2.0_unigene85511 SustainPine v2.0 596
AutoFact: Histone deacetylase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U4N6_VITVI 0.0
FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 0.0
Internal
sp_v2.0_unigene86532 SustainPine v2.0 504
AutoFact: Histone deacetylase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U4N6_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain