Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Histone deacetylase superfamily

Term: IPR000286  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene36927 SustainPine v2.0 980
AutoFact: Cleavage and polyadenylation specificity factor subunit 1 n=2 Tax=Arabidopsis RepID=CPSF1_ARATH 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity factor subunit 1-like 0.0
Internal
sp_v2.0_unigene42667 SustainPine v2.0 605
AutoFact: histone deacetylase 15 [Arabidopsis thaliana] gb|AEE76111.1| histone deacetylase 15 [Arabidopsis thaliana] 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 1.16482e-32
Internal
sp_v2.0_unigene43017 SustainPine v2.0 323
AutoFact: Histone deacetylase hda1, putative n=1 Tax=Ricinus communis RepID=B9RE34_RICCO 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 7.25617e-39
Internal
sp_v2.0_unigene45321 SustainPine v2.0 359
AutoFact: histone deacetylase, putative [Arabidopsis thaliana] 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Internal
sp_v2.0_unigene46501 SustainPine v2.0 341
AutoFact: Histone deacetylase n=1 Tax=Populus trichocarpa RepID=B9H356_POPTR 1.0e-26
FL-Next: sp=Histone deacetylase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 5.04859e-31
Internal
sp_v2.0_unigene65046 SustainPine v2.0 470
AutoFact: Histone deacetylase complex, catalytic component HDA1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SZN1_PHYPA 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Internal
sp_v2.0_unigene79919 SustainPine v2.0 462
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 7.0e-36
FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 1.05097e-42
Internal
sp_v2.0_unigene85511 SustainPine v2.0 596
AutoFact: Histone deacetylase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U4N6_VITVI 0.0
FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 0.0
Internal
sp_v2.0_unigene86532 SustainPine v2.0 504
AutoFact: Histone deacetylase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U4N6_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain