Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: LisH dimerisation motif, subgroup

Term: IPR013720  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene619 SustainPine v2.0 1724
• AutoFact: pfam00400, WD40, WD domain, G-beta repeat 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Putative Complete
sp_v2.0_unigene1559 SustainPine v2.0 2865
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ramosa 1 enhancer locus 2 0.0
Putative Complete
sp_v2.0_unigene2114 SustainPine v2.0 2117
• AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus] 0.0
• FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene2410 SustainPine v2.0 4881
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene3226 SustainPine v2.0 843
• AutoFact: STYLOSA protein n=1 Tax=Antirrhinum majus RepID=Q6H976_ANTMA 0.0
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Internal
sp_v2.0_unigene4413 SustainPine v2.0 1525
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ramosa 1 enhancer locus 2 0.0
Putative Complete
sp_v2.0_unigene4931 SustainPine v2.0 1765
• AutoFact: Transcriptional corepressor LEUNIG n=1 Tax=Arabidopsis thaliana RepID=F4JUD2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Putative Complete
sp_v2.0_unigene5772 SustainPine v2.0 1066
• AutoFact: Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like n=1 Tax=Medicago truncatula RepID=Q2HW32_MEDTR 0.0
• FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: topless-related protein 3 0.0
C-terminus
sp_v2.0_unigene6310 SustainPine v2.0 418
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 8.24703e-21
N-terminus
sp_v2.0_unigene7374 SustainPine v2.0 884
• AutoFact: Unassigned protein
• FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene8139 SustainPine v2.0 1261
• AutoFact: [R] COG2319 FOG: WD40 repeat 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein topless 0.0
Putative Complete
sp_v2.0_unigene10200 SustainPine v2.0 654
• AutoFact: STYLOSA protein n=1 Tax=Antirrhinum majus RepID=Q6H976_ANTMA 5.0e-38
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcriptional corepressor leunig-like isoform 2 2.56438e-43
Internal
sp_v2.0_unigene11056 SustainPine v2.0 996
• AutoFact: Unassigned protein
• FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ddb1- and cul4-associated factor homolog 1-like 0.0
Internal
sp_v2.0_unigene11127 SustainPine v2.0 839
• AutoFact: BRI1-KD interacting protein 132 [Oryza sativa Japonica Group] 3.0e-33
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: nucleolar and coiled-body phosphoprotein 7.79612e-41
C-terminus
sp_v2.0_unigene11354 SustainPine v2.0 1734
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
C-terminus
sp_v2.0_unigene11568 SustainPine v2.0 1083
• AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein topless 0.0
N-terminus
sp_v2.0_unigene11932 SustainPine v2.0 379
• AutoFact: STY-L protein n=1 Tax=Antirrhinum majus RepID=Q6H975_ANTMA 2.0e-22
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: leunig-like protein 9.61843e-26
Internal
sp_v2.0_unigene12599 SustainPine v2.0 429
• AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 4.00001e-41
• FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ramosa 1 enhancer locus 2 0.0
Internal
sp_v2.0_unigene13165 SustainPine v2.0 1913
• AutoFact: pfam00400, WD40, WD domain, G-beta repeat 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Putative Complete
sp_v2.0_unigene13544 SustainPine v2.0 2763
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wd repeat-containing 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain