Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: LisH dimerisation motif, subgroup

Term: IPR013720  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene13833 SustainPine v2.0 415
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 2.21157e-17
Internal
sp_v2.0_unigene15077 SustainPine v2.0 1635
AutoFact: Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: topless-related protein 3-like 0.0
Putative Complete
sp_v2.0_unigene16931 SustainPine v2.0 1528
AutoFact: BRI1-KD interacting protein 132 [Oryza sativa Japonica Group] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleolar and coiled-body phosphoprotein 1.62488e-28
Complete
sp_v2.0_unigene16937 SustainPine v2.0 1610
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
Complete
sp_v2.0_unigene17531 SustainPine v2.0 2398
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Complete
sp_v2.0_unigene17804 SustainPine v2.0 1290
AutoFact: LisH and RanBPM domain-containing protein [Arabidopsis thaliana] gb|AAO24554.1| At1g61150 [Arabidopsis thaliana] dbj|BAF00099.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33789.1| LisH and RanBPM domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: and domain-containing protein 0.0
Complete
sp_v2.0_unigene18545 SustainPine v2.0 1259
AutoFact: LisH and RanBPM domain-containing protein [Arabidopsis thaliana] gb|AAO24554.1| At1g61150 [Arabidopsis thaliana] dbj|BAF00099.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33789.1| LisH and RanBPM domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: and domain-containing protein 0.0
Complete
sp_v2.0_unigene20582 SustainPine v2.0 325
AutoFact: Beta transducin-like protein, putative [Solanum bulbocastanum] 6.0e-28
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 8.97972e-33
Internal
sp_v2.0_unigene20944 SustainPine v2.0 742
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 7.0e-05
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional corepressor leunig 3.10352e-31
Internal
sp_v2.0_unigene21708 SustainPine v2.0 478
AutoFact: LisH domain containing protein 9.0e-06
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein loc100501624 7.01384e-10
N-terminus
sp_v2.0_unigene22395 SustainPine v2.0 1099
AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene23076 SustainPine v2.0 1552
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene23409 SustainPine v2.0 1192
AutoFact: DEAD-box ATP-dependent RNA helicase 56 n=2 Tax=Arabidopsis thaliana RepID=F4JWF6_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 56 0.0
C-terminus
sp_v2.0_unigene23686 SustainPine v2.0 932
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 5.0e-31
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 8.71081e-31
Putative C-terminus
sp_v2.0_unigene23816 SustainPine v2.0 721
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
Internal
sp_v2.0_unigene23883 SustainPine v2.0 1245
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene24173 SustainPine v2.0 2218
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: Isoform 2 of Topless-related protein 4 OS=Arabidopsis thaliana GN=TPR4 0.0
Blast2go: topless-related protein 4-like 0.0
Putative C-terminus
sp_v2.0_unigene24312 SustainPine v2.0 701
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
Internal
sp_v2.0_unigene25149 SustainPine v2.0 2211
AutoFact: [R] COG2319 FOG: WD40 repeat 3.0e-07
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 0.0
C-terminus
sp_v2.0_unigene25897 SustainPine v2.0 920
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain