Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Ribosomal protein L28

Term: IPR001383  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene16372 SustainPine v2.0 3524
AutoFact: HEAT SHOCK PROTEIN 89.1 [Arabidopsis thaliana] gb|AEE74602.1| HEAT SHOCK PROTEIN 89.1 [Arabidopsis thaliana] 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Blast2go: heat-shock protein 0.0
Misassembled
sp_v2.0_unigene17264 SustainPine v2.0 970
AutoFact: heat shock protein 81-1 [Arabidopsis thaliana] dbj|BAA98082.1| heat-shock protein [Arabidopsis thaliana] gb|AAM91104.1| AT5g52640/F6N7_13 [Arabidopsis thaliana] gb|AAN46890.1| At5g52640/F6N7_13 [Arabidopsis thaliana] gb|AED96244.1| heat shock protein 81-1 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Blast2go: heat shock protein 81-1 0.0
Putative N-terminus
sp_v2.0_unigene17312 SustainPine v2.0 1156
AutoFact: 50S ribosomal protein L28 [Arabidopsis thaliana] sp|O22795.2|RK28_ARATH RecName: Full=50S ribosomal protein L28, chloroplastic; AltName: Full=CL28; Flags: Precursor gb|AAL62365.1| putative chloroplast 50S ribosomal protein L28 [Arabidopsis thaliana] gb|AA 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein chloroplast 0.0
Complete
sp_v2.0_unigene22895 SustainPine v2.0 1353
AutoFact: 60S ribosomal protein L24, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9SNH4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein mitochondrial 0.0
Complete
sp_v2.0_unigene25348 SustainPine v2.0 663
AutoFact: heat shock protein [Hevea brasiliensis] 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Blast2go: heat shock protein 81-1 0.0
Internal
sp_v2.0_unigene25955 SustainPine v2.0 1336
AutoFact: Chaperone protein htpG family protein [Arabidopsis thaliana] gb|AEC05779.1| Chaperone protein htpG family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Blast2go: chaperone protein htpg family protein 0.0
N-terminus
sp_v2.0_unigene28319 SustainPine v2.0 3291
AutoFact: Chaperone protein htpG family protein [Arabidopsis thaliana] gb|AAL32008.1|AF436826_1 At2g04030/F3C11.14 [Arabidopsis thaliana] gb|AAD32922.1| putative heat shock protein [Arabidopsis thaliana] gb|AAK96633.1| At2g04030/F3C11.14 [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Blast2go: heat-shock protein 0.0
Complete
sp_v2.0_unigene62429 SustainPine v2.0 913
AutoFact: heat shock protein HSP81-1 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Blast2go: heat shock protein 81-1 0.0
Putative N-terminus
sp_v2.0_unigene77399 SustainPine v2.0 649
AutoFact: molecular chaperone Hsp90-1 [Nicotiana benthamiana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 90 0.0
Complete
sp_v2.0_unigene79890 SustainPine v2.0 478
AutoFact: Hsp90-2-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 90 0.0
Putative Complete
sp_v2.0_unigene80137 SustainPine v2.0 468
AutoFact: RecName: Full=50S ribosomal protein L28, chloroplastic; AltName: Full=CL28; Flags: Precursor pir||R5NT28 ribosomal protein L28 precursor, chloroplast - tobacco pdb|3BBO|Y Chain Y, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo- 9.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein chloroplastic 3.36017e-36
N-terminus
sp_v2.0_unigene82317 SustainPine v2.0 649
AutoFact: putative heat-shock protein 90 [Euphorbia esula] 4.0e-23
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Blast2go: endoplasmin-like protein 0.0
C-terminus
sp_v2.0_unigene82322 SustainPine v2.0 809
AutoFact: RecName: Full=Endoplasmin homolog; AltName: Full=Glucose-regulated protein 94 homolog; Short=GRP-94 homolog; Flags: Precursor gb|AAA16785.1| heat shock protein 90 [Catharanthus roseus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 90 0.0
Internal
sp_v2.0_unigene85606 SustainPine v2.0 480
AutoFact: molecular chaperone Hsp90-1 [Nicotiana benthamiana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 90 0.0
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain