Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Cold-shock protein, DNA-binding

Term: IPR002059  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1816 SustainPine v2.0 870
AutoFact: E3 ubiquitin ligase n=1 Tax=Cimex lectularius RepID=D1FPM1_CIMLE 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cchc-type zinc finger protein cg3800-like 0.0
C-terminus
sp_v2.0_unigene11678 SustainPine v2.0 461
AutoFact: FAP multi-domain protein 2.0e-18
Coding
sp_v2.0_unigene15416 SustainPine v2.0 1282
AutoFact: Putative glycine-rich protein n=1 Tax=Picea glauca RepID=Q3HRT2_PICGL 2.0e-40
FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene17111 SustainPine v2.0 1493
AutoFact: protein serine/arginine-rich 22 [Arabidopsis thaliana] ref|NP_001078474.1| protein serine/arginine-rich 22 [Arabidopsis thaliana] emb|CAA19765.1| RSZp22 splicing factor [Arabidopsis thaliana] gb|AAD12769.1| 9G8-like SR protein [Arabidopsis thaliana] emb|C 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich splicing 2.02996e-36
Complete
sp_v2.0_unigene26505 SustainPine v2.0 907
AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 8.0e-30
FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: glycine-rich rna-binding protein 1.60522e-29
Complete
sp_v2.0_unigene30468 SustainPine v2.0 592
AutoFact: plastocyanin-like domain-containing protein [Arabidopsis thaliana] gb|AAB95306.1| putative phytocyanin [Arabidopsis thaliana] gb|AEC07879.1| plastocyanin-like domain-containing protein [Arabidopsis thaliana] 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastocyanin-like domain-containing protein 3.72481e-34
N-terminus
sp_v2.0_unigene45231 SustainPine v2.0 357
AutoFact: FAP multi-domain protein 4.0e-16
Coding
sp_v2.0_unigene56073 SustainPine v2.0 330
AutoFact: Drf_FH1 multi-domain protein 6.0e-20
Coding
sp_v2.0_unigene61541 SustainPine v2.0 486
AutoFact: GRP multi-domain protein 2.0e-13
unknown
sp_v2.0_unigene61603 SustainPine v2.0 483
AutoFact: FAP multi-domain protein 2.0e-23
Coding
sp_v2.0_unigene61703 SustainPine v2.0 441
AutoFact: Drf_FH1 multi-domain protein 2.0e-32
Coding
sp_v2.0_unigene62431 SustainPine v2.0 561
AutoFact: FAP multi-domain protein 2.0e-17
Coding
sp_v2.0_unigene67514 SustainPine v2.0 358
AutoFact: FAP multi-domain protein 2.0e-12
Coding
sp_v2.0_unigene78569 SustainPine v2.0 651
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NLJ2_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proteasome subunit beta type-6 0.0
C-terminus
sp_v2.0_unigene79555 SustainPine v2.0 596
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NLJ2_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proteasome subunit beta type-6 0.0
C-terminus
sp_v2.0_unigene80416 SustainPine v2.0 297
AutoFact: GRP multi-domain protein 6.0e-09
Coding
sp_v2.0_unigene81339 SustainPine v2.0 765
AutoFact: Putative glycine-rich protein n=1 Tax=Picea glauca RepID=Q3HRT2_PICGL 5.0e-20
FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein 2.64476e-24
Putative Complete
sp_v2.0_unigene81825 SustainPine v2.0 402
AutoFact: translation initiation factor eIF-3 subunit 6 [Arabidopsis thaliana] gb|AAG53613.1|AF285832_1 eukaryotic initiation factor 3E subunit [Arabidopsis thaliana] gb|AAK64017.1| putative translation initiation factor 3 [Arabidopsis thaliana] gb|AAL85088.1| puta 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.7196e-28
Internal
sp_v2.0_unigene84941 SustainPine v2.0 581
AutoFact: Putative glycine-rich protein n=1 Tax=Picea glauca RepID=Q3HRT2_PICGL 1.0e-13
FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: universal minicircle sequence binding protein 1.47095e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain