Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Extensin repeat

Term: IPR006706  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3050 SustainPine v2.0 1563
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene4590 SustainPine v2.0 1749
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Putative Complete
sp_v2.0_unigene7462 SustainPine v2.0 843
AutoFact: Extensin_2 multi-domain protein 4.0e-24
Coding
sp_v2.0_unigene12555 SustainPine v2.0 1829
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene13055 SustainPine v2.0 1209
AutoFact: Extensin_2 multi-domain protein 1.0e-11
Putative coding
sp_v2.0_unigene15629 SustainPine v2.0 1154
AutoFact: DUF1421 multi-domain protein 8.0e-19
Coding
sp_v2.0_unigene15697 SustainPine v2.0 1492
AutoFact: proteophosphoglycan 5 [Leishmania major strain Friedlin] emb|CBZ12682.1| proteophosphoglycan 5 [Leishmania major strain Friedlin] 8.0e-15
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v2.0_unigene15720 SustainPine v2.0 577
AutoFact: Extensin_2 multi-domain protein 3.0e-23
Coding
sp_v2.0_unigene15869 SustainPine v2.0 1816
AutoFact: Proteophosphoglycan ppg1 n=1 Tax=Leishmania mexicana MHOM/GT/2001/U1103 RepID=E9B5T6_LEIME 2.0e-12
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
C-terminus
sp_v2.0_unigene15896 SustainPine v2.0 554
AutoFact: Extensin_2 multi-domain protein 1.0e-16
Coding
sp_v2.0_unigene15982 SustainPine v2.0 920
AutoFact: Flocculin-like protein n=1 Tax=Candida albicans RepID=Q59SG9_CANAL 4.0e-05
Coding
sp_v2.0_unigene16157 SustainPine v2.0 634
AutoFact: Extensin_2 multi-domain protein 7.0e-23
Coding
sp_v2.0_unigene16334 SustainPine v2.0 1777
AutoFact: Atrophin-1 multi-domain protein 4.0e-18
Coding
sp_v2.0_unigene16348 SustainPine v2.0 1580
AutoFact: DUF1421 multi-domain protein 2.0e-16
Coding
sp_v2.0_unigene16800 SustainPine v2.0 1099
AutoFact: Drf_FH1 multi-domain protein 2.0e-23
Coding
sp_v2.0_unigene16893 SustainPine v2.0 1979
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v2.0_unigene17173 SustainPine v2.0 1180
AutoFact: Extensin_2 multi-domain protein 5.0e-12
Coding
sp_v2.0_unigene17378 SustainPine v2.0 830
AutoFact: Extensin_2 multi-domain protein 5.0e-10
Putative coding
sp_v2.0_unigene21156 SustainPine v2.0 1154
AutoFact: Tyrosine-rich hydroxyproline-rich glycoprotein (Fragment) n=1 Tax=Petroselinum crispum RepID=Q40793_PETCR 7.0e-25
FL-Next: tr=Putative uncharacterized protein Sb03g042800; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: tyrosine-rich hydroxyproline-rich glycoprotein 2.02773e-28
Putative N-terminus
sp_v2.0_unigene21288 SustainPine v2.0 3229
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain