Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Extensin repeat

Term: IPR006706  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene24757 SustainPine v2.0 1053
• AutoFact: DUF1421 multi-domain protein 2.0e-18
Coding
sp_v2.0_unigene24762 SustainPine v2.0 569
• AutoFact: Drf_FH1 multi-domain protein 4.0e-15
Coding
sp_v2.0_unigene24763 SustainPine v2.0 601
• AutoFact: Extensin_2 multi-domain protein 2.0e-14
Putative coding
sp_v2.0_unigene25982 SustainPine v2.0 425
• AutoFact: Selectin, platelet (P-selectin) ligand, isoform CRA_b n=2 Tax=Mus musculus RepID=Q3TA56_MOUSE 3.0e-08
• FL-Next: sp=Putative membrane protein ycf1; Cucumis sativus (Cucumber). Plastid; Chloroplast. 0.0
• Blast2go: sica antigen 1.52771e-11
Internal
sp_v2.0_unigene26609 SustainPine v2.0 596
• AutoFact: Extensin_2 multi-domain protein 5.0e-18
Coding
sp_v2.0_unigene26814 SustainPine v2.0 378
• AutoFact: Extensin_2 multi-domain protein 3.0e-13
Putative coding
sp_v2.0_unigene28343 SustainPine v2.0 4665
• AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
• FL-Next: sp=DNA-directed RNA polymerase; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Putative C-terminus
sp_v2.0_unigene30534 SustainPine v2.0 438
• AutoFact: Extensin_2 multi-domain protein 1.0e-13
unknown
sp_v2.0_unigene31280 SustainPine v2.0 561
• AutoFact: Extensin_2 multi-domain protein 7.0e-16
unknown
sp_v2.0_unigene37265 SustainPine v2.0 366
• AutoFact: Extensin_2 multi-domain protein 7.0e-17
Coding
sp_v2.0_unigene56073 SustainPine v2.0 330
• AutoFact: Drf_FH1 multi-domain protein 6.0e-20
Coding
sp_v2.0_unigene61103 SustainPine v2.0 1102
• AutoFact: Drf_FH1 multi-domain protein 1.0e-18
Coding
sp_v2.0_unigene61574 SustainPine v2.0 617
• AutoFact: Extensin_2 multi-domain protein 6.0e-21
Coding
sp_v2.0_unigene61581 SustainPine v2.0 451
• AutoFact: Drf_FH1 multi-domain protein 2.0e-34
Coding
sp_v2.0_unigene61602 SustainPine v2.0 629
• AutoFact: Drf_FH1 multi-domain protein 2.0e-33
unknown
sp_v2.0_unigene61603 SustainPine v2.0 483
• AutoFact: FAP multi-domain protein 2.0e-23
Coding
sp_v2.0_unigene61703 SustainPine v2.0 441
• AutoFact: Drf_FH1 multi-domain protein 2.0e-32
Coding
sp_v2.0_unigene61922 SustainPine v2.0 508
• AutoFact: Drf_FH1 multi-domain protein 4.0e-26
Coding
sp_v2.0_unigene62644 SustainPine v2.0 497
• AutoFact: FAP multi-domain protein 1.0e-21
Coding
sp_v2.0_unigene62851 SustainPine v2.0 576
• AutoFact: Drf_FH1 multi-domain protein 2.0e-37
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain