Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Repetitive proline-rich cell wall protein repeat

Term: IPR003883  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3050 SustainPine v2.0 1563
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene5000 SustainPine v2.0 1035
AutoFact: heavy-metal-associated domain-containing protein [Arabidopsis thaliana] gb|ABN04757.1| At1g23000 [Arabidopsis thaliana] gb|AEE30320.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana] 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast-targeted copper 1.83791e-22
N-terminus
sp_v2.0_unigene6900 SustainPine v2.0 937
AutoFact: Sex determining protein n=3 Tax=Mus musculus musculus RepID=O35861_MOUSE 5.0e-20
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: sex determining protein 1.52923e-22
Putative C-terminus
sp_v2.0_unigene7462 SustainPine v2.0 843
AutoFact: Extensin_2 multi-domain protein 4.0e-24
Coding
sp_v2.0_unigene11846 SustainPine v2.0 1716
AutoFact: Drf_FH1 multi-domain protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.85891e-26
Complete
sp_v2.0_unigene12412 SustainPine v2.0 531
AutoFact: Atrophin-1 multi-domain protein 1.0e-05
Coding
sp_v2.0_unigene12555 SustainPine v2.0 1829
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene15129 SustainPine v2.0 1186
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 1.0e-19
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline-rich cell wall protein 3.01637e-23
Complete
sp_v2.0_unigene15629 SustainPine v2.0 1154
AutoFact: DUF1421 multi-domain protein 8.0e-19
Coding
sp_v2.0_unigene15697 SustainPine v2.0 1492
AutoFact: proteophosphoglycan 5 [Leishmania major strain Friedlin] emb|CBZ12682.1| proteophosphoglycan 5 [Leishmania major strain Friedlin] 8.0e-15
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v2.0_unigene15720 SustainPine v2.0 577
AutoFact: Extensin_2 multi-domain protein 3.0e-23
Coding
sp_v2.0_unigene15829 SustainPine v2.0 1510
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 2.0e-24
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline rich protein 1.12188e-28
Complete
sp_v2.0_unigene15869 SustainPine v2.0 1816
AutoFact: Proteophosphoglycan ppg1 n=1 Tax=Leishmania mexicana MHOM/GT/2001/U1103 RepID=E9B5T6_LEIME 2.0e-12
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
C-terminus
sp_v2.0_unigene15982 SustainPine v2.0 920
AutoFact: Flocculin-like protein n=1 Tax=Candida albicans RepID=Q59SG9_CANAL 4.0e-05
Coding
sp_v2.0_unigene16064 SustainPine v2.0 1094
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 1.0e-24
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline rich protein 1.617e-29
Complete
sp_v2.0_unigene16157 SustainPine v2.0 634
AutoFact: Extensin_2 multi-domain protein 7.0e-23
Coding
sp_v2.0_unigene16334 SustainPine v2.0 1777
AutoFact: Atrophin-1 multi-domain protein 4.0e-18
Coding
sp_v2.0_unigene16348 SustainPine v2.0 1580
AutoFact: DUF1421 multi-domain protein 2.0e-16
Coding
sp_v2.0_unigene16800 SustainPine v2.0 1099
AutoFact: Drf_FH1 multi-domain protein 2.0e-23
Coding
sp_v2.0_unigene16893 SustainPine v2.0 1979
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain