Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Repetitive proline-rich cell wall protein repeat

Term: IPR003883  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene84120 SustainPine v2.0 275
AutoFact: Extensin_2 multi-domain protein 1.0e-06
Coding
sp_v2.0_unigene84858 SustainPine v2.0 703
AutoFact: Proline-rich-like protein n=1 Tax=Asparagus officinalis RepID=Q96232_ASPOF 2.0e-24
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline rich protein 4.19884e-30
Putative Complete
sp_v2.0_unigene89580 SustainPine v2.0 464
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
Blast2go: extensin-like protein 0.0
Internal
sp_v2.0_unigene89581 SustainPine v2.0 453
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T725_VITVI 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.8026e-45
Internal
sp_v2.0_unigene90348 SustainPine v2.0 892
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 1.0e-24
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline rich protein 3.88942e-30
C-terminus
sp_v2.0_unigene92197 SustainPine v2.0 827
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain