Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Repetitive proline-rich cell wall protein repeat

Term: IPR003883  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene30608 SustainPine v2.0 869
AutoFact: bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana] gb|AAD43607.1|AC005698_6 T3P18.6 [Arabidopsis thaliana] gb|AAK76636.1| putative proline-rich cell wall protein [Arabidopsis thaliana] gb|AAL85077.1| 2.0e-15
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline-rich cell wall protein 2.1341e-28
C-terminus
sp_v2.0_unigene33721 SustainPine v2.0 732
AutoFact: Atrophin-1 multi-domain protein 2.0e-18
Coding
sp_v2.0_unigene36412 SustainPine v2.0 594
AutoFact: Proline-rich-like protein n=1 Tax=Asparagus officinalis RepID=Q96232_ASPOF 9.0e-26
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline-rich cell wall protein 1.12277e-31
Complete
sp_v2.0_unigene43079 SustainPine v2.0 720
AutoFact: Proline-rich-like protein n=1 Tax=Asparagus officinalis RepID=Q96232_ASPOF 2.0e-15
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: lipid binding 1.45797e-23
Putative Complete
sp_v2.0_unigene60951 SustainPine v2.0 606
AutoFact: Tryp_alpha_amyl domain containing protein 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipid binding 6.6327e-21
C-terminus
sp_v2.0_unigene61103 SustainPine v2.0 1102
AutoFact: Drf_FH1 multi-domain protein 1.0e-18
Coding
sp_v2.0_unigene61200 SustainPine v2.0 648
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 2.0e-14
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline-rich cell wall protein 1.54694e-17
N-terminus
sp_v2.0_unigene61922 SustainPine v2.0 508
AutoFact: Drf_FH1 multi-domain protein 4.0e-26
Coding
sp_v2.0_unigene62851 SustainPine v2.0 576
AutoFact: Drf_FH1 multi-domain protein 2.0e-37
Coding
sp_v2.0_unigene63691 SustainPine v2.0 709
AutoFact: Extensin_2 multi-domain protein 1.0e-08
Coding
sp_v2.0_unigene63818 SustainPine v2.0 369
AutoFact: Extensin_2 multi-domain protein 2.0e-24
Coding
sp_v2.0_unigene65262 SustainPine v2.0 360
AutoFact: Extensin_2 multi-domain protein 5.0e-27
Coding
sp_v2.0_unigene67522 SustainPine v2.0 619
AutoFact: proline-rich-like protein [Asparagus officinalis] 7.0e-14
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline-rich protein 3.22455e-14
Complete
sp_v2.0_unigene67973 SustainPine v2.0 400
AutoFact: Extensin_2 multi-domain protein 3.0e-12
unknown
sp_v2.0_unigene74865 SustainPine v2.0 359
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 6.0e-14
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: lipid binding 1.06431e-17
C-terminus
sp_v2.0_unigene76783 SustainPine v2.0 508
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Blast2go: extensin-like protein 0.0
Internal
sp_v2.0_unigene79239 SustainPine v2.0 273
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 2.0e-31
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Blast2go: extensin-like protein 7.1712e-39
Internal
sp_v2.0_unigene79458 SustainPine v2.0 382
AutoFact: Extensin_2 multi-domain protein 1.0e-15
Coding
sp_v2.0_unigene80103 SustainPine v2.0 423
AutoFact: Extensin_2 multi-domain protein 1.0e-16
unknown
sp_v2.0_unigene80182 SustainPine v2.0 322
AutoFact: pfam04554, Extensin_2, Extensin-like region 3.0e-24
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain