Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Patched

Term: IPR003392  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4590 SustainPine v2.0 1749
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Putative Complete
sp_v2.0_unigene6900 SustainPine v2.0 937
AutoFact: Sex determining protein n=3 Tax=Mus musculus musculus RepID=O35861_MOUSE 5.0e-20
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: sex determining protein 1.52923e-22
Putative C-terminus
sp_v2.0_unigene7462 SustainPine v2.0 843
AutoFact: Extensin_2 multi-domain protein 4.0e-24
Coding
sp_v2.0_unigene10604 SustainPine v2.0 2093
AutoFact: Cholesterol transport protein n=1 Tax=Populus trichocarpa RepID=B9HPX9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: niemann-pick c1 0.0
C-terminus
sp_v2.0_unigene11678 SustainPine v2.0 461
AutoFact: FAP multi-domain protein 2.0e-18
Coding
sp_v2.0_unigene11846 SustainPine v2.0 1716
AutoFact: Drf_FH1 multi-domain protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.85891e-26
Complete
sp_v2.0_unigene12512 SustainPine v2.0 792
AutoFact: Cholesterol transport protein n=1 Tax=Populus trichocarpa RepID=B9HPX9_POPTR 0.0
FL-Next: tr=Cholesterol transport protein; subsp. trichocarpa). 0.0
Blast2go: patched family protein 0.0
Internal
sp_v2.0_unigene14957 SustainPine v2.0 510
AutoFact: Cholesterol transport protein n=1 Tax=Populus trichocarpa RepID=B9HPX9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: niemann-pick c1 protein 0.0
Internal
sp_v2.0_unigene15831 SustainPine v2.0 815
AutoFact: Gly_rich multi-domain protein 2.0e-21
Blast2go: hypothetical protein SEVCU037_0917 [Staphylococcus epidermidis VCU037] 8.29552e-12
Coding
sp_v2.0_unigene16157 SustainPine v2.0 634
AutoFact: Extensin_2 multi-domain protein 7.0e-23
Coding
sp_v2.0_unigene16800 SustainPine v2.0 1099
AutoFact: Drf_FH1 multi-domain protein 2.0e-23
Coding
sp_v2.0_unigene17185 SustainPine v2.0 705
AutoFact: Fibrinogen and fibronectin n=1 Tax=Culex quinquefasciatus RepID=B0WKJ3_CULQU 1.0e-09
Blast2go: fibrinogen and fibronectin 4.77888e-12
Coding
sp_v2.0_unigene17886 SustainPine v2.0 726
AutoFact: Gly_rich multi-domain protein 6.0e-19
Coding
sp_v2.0_unigene21156 SustainPine v2.0 1154
AutoFact: Tyrosine-rich hydroxyproline-rich glycoprotein (Fragment) n=1 Tax=Petroselinum crispum RepID=Q40793_PETCR 7.0e-25
FL-Next: tr=Putative uncharacterized protein Sb03g042800; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: tyrosine-rich hydroxyproline-rich glycoprotein 2.02773e-28
Putative N-terminus
sp_v2.0_unigene21288 SustainPine v2.0 3229
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Complete
sp_v2.0_unigene23225 SustainPine v2.0 1057
AutoFact: PREDICTED: similar to retinitis pigmentosa 1-like 1 protein [Gallus gallus] 3.0e-05
Blast2go: unnamed protein product [Vitis vinifera] 1.6783e-12
Coding
sp_v2.0_unigene23368 SustainPine v2.0 1394
AutoFact: Putative p23 co-chaperone n=1 Tax=Cryptomeria japonica RepID=Q1XG56_CRYJA 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein _027940-like 0.0
Complete
sp_v2.0_unigene23480 SustainPine v2.0 803
AutoFact: pfam04554, Extensin_2, Extensin-like region 2.0e-24
Coding
sp_v2.0_unigene24735 SustainPine v2.0 1496
AutoFact: Atrophin-1 multi-domain protein 5.0e-32
Coding
sp_v2.0_unigene25605 SustainPine v2.0 437
AutoFact: GRP multi-domain protein 4.0e-12
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain