Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Histone H2A

Term: IPR002119  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene60664 SustainPine v2.0 422
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9P2K6_PICSI 2.0e-13
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 9.0643e-17
N-terminus
sp_v2.0_unigene60793 SustainPine v2.0 686
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9P2K6_PICSI 8.0e-23
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 3.38063e-28
Putative N-terminus
sp_v2.0_unigene61171 SustainPine v2.0 921
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 3.0e-35
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.55544e-43
Complete
sp_v2.0_unigene61261 SustainPine v2.0 904
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 7.0e-34
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 6.44597e-44
Complete
sp_v2.0_unigene61681 SustainPine v2.0 1746
AutoFact: Glucan endo-1,3-beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9RYW1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Complete
sp_v2.0_unigene62364 SustainPine v2.0 1357
AutoFact: O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] gb|ABH04632.1| At5g55180 [Arabidopsis thaliana] gb|AED96596.1| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: o-glycosyl hydrolases family 17 protein 0.0
Complete
sp_v2.0_unigene62682 SustainPine v2.0 299
AutoFact: thioredoxin [Limonium bicolor] 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene63760 SustainPine v2.0 416
AutoFact: Histone H2A n=1 Tax=Sorghum bicolor RepID=C5YYL4_SORBI 2.0e-28
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.74626e-36
N-terminus
sp_v2.0_unigene64110 SustainPine v2.0 555
AutoFact: Histone H2A (Fragment) n=1 Tax=Hyacinthus orientalis RepID=Q5YJR4_HYAOR 4.0e-33
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 1.97583e-43
Complete
sp_v2.0_unigene65161 SustainPine v2.0 608
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 0.0
FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
Blast2go: dna repair protein rad23-3 0.0
C-terminus
sp_v2.0_unigene66125 SustainPine v2.0 623
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RFN2_RICCO 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Internal
sp_v2.0_unigene66823 SustainPine v2.0 366
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 1.0e-18
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone 7.09788e-24
Putative N-terminus
sp_v2.0_unigene69664 SustainPine v2.0 494
AutoFact: pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100381888 0.0
Internal
sp_v2.0_unigene70285 SustainPine v2.0 427
AutoFact: Histone H2A (Fragment) n=1 Tax=Hyacinthus orientalis RepID=Q5YJR4_HYAOR 2.0e-19
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 8.86314e-26
Putative Complete
sp_v2.0_unigene71278 SustainPine v2.0 317
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 3.0e-15
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone 2 1.07778e-19
C-terminus
sp_v2.0_unigene74542 SustainPine v2.0 311
AutoFact: putative glucan-endo-1,3-beta-glucosidase precursor [Pinus pinaster] 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: o-glycosyl hydrolases family 17 protein 6.06238e-29
Internal
sp_v2.0_unigene76811 SustainPine v2.0 484
AutoFact: Histone H2A n=2 Tax=Magnoliophyta RepID=B9REZ0_RICCO 8.0e-11
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2a 2.90525e-13
N-terminus
sp_v2.0_unigene76874 SustainPine v2.0 810
AutoFact: Histone H2A n=1 Tax=Ricinus communis RepID=B9S3Z3_RICCO 1.0e-22
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.7058e-28
Putative Complete
sp_v2.0_unigene78522 SustainPine v2.0 1046
AutoFact: Glucan endo-1,3-beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9SH66_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Internal
sp_v2.0_unigene78688 SustainPine v2.0 967
AutoFact: Pollen allergen CJP38 n=1 Tax=Cryptomeria japonica RepID=Q588B8_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta glucanase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain