Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: SWAP/Surp

Term: IPR000061  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2674 SustainPine v2.0 1031
AutoFact: SWAP/Surp domain-containing protein [Arabidopsis thaliana] gb|AAK64161.1| unknown protein [Arabidopsis thaliana] gb|AAM20098.1| unknown protein [Arabidopsis thaliana] gb|AED96581.1| SWAP/Surp domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swap surp domain-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene4164 SustainPine v2.0 2072
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: helicase and zinc finger domain-containing protein 0.0
Putative Complete
sp_v2.0_unigene5862 SustainPine v2.0 1340
AutoFact: putative U2-associated SR140 protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene8379 SustainPine v2.0 1412
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene10411 SustainPine v2.0 1723
AutoFact: [DKT] COG5035 Cell cycle control protein 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division control protein 50 0.0
Complete
sp_v2.0_unigene11098 SustainPine v2.0 595
AutoFact: U2-associated protein SR140 [Arabidopsis thaliana] gb|AAK25922.1|AF360212_1 unknown protein [Arabidopsis thaliana] gb|AAK64118.1| unknown protein [Arabidopsis thaliana] gb|AED93395.1| U2-associated protein SR140 [Arabidopsis thaliana] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 1.25054e-19
N-terminus
sp_v2.0_unigene13076 SustainPine v2.0 463
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNU3_RICCO 0.0
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene13220 SustainPine v2.0 847
AutoFact: SWAP/Surp domain-containing protein [Arabidopsis thaliana] gb|AAK64161.1| unknown protein [Arabidopsis thaliana] gb|AAM20098.1| unknown protein [Arabidopsis thaliana] gb|AED96581.1| SWAP/Surp domain-containing protein [Arabidopsis thaliana] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swap surp domain-containing protein 8.4218e-43
Putative Complete
sp_v2.0_unigene17233 SustainPine v2.0 2031
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swap domain-containing protein 0.0
Complete
sp_v2.0_unigene21206 SustainPine v2.0 2243
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: swap surp domain-containing protein 0.0
C-terminus
sp_v2.0_unigene21288 SustainPine v2.0 3229
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Complete
sp_v2.0_unigene26975 SustainPine v2.0 2369
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swap domain-containing protein 0.0
Complete
sp_v2.0_unigene29718 SustainPine v2.0 553
AutoFact: G patch domain-containing protein 1 [Arabidopsis thaliana] dbj|BAC42755.1| unknown protein [Arabidopsis thaliana] gb|AAP40415.1| unknown protein [Arabidopsis thaliana] gb|AED93116.1| G patch domain-containing protein 1 [Arabidopsis thaliana] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: g patch domain-containing protein 0.0
N-terminus
sp_v2.0_unigene33853 SustainPine v2.0 466
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 3.0e-18
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 1.73916e-26
N-terminus
sp_v2.0_unigene34874 SustainPine v2.0 472
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 9.99967e-42
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Internal
sp_v2.0_unigene38704 SustainPine v2.0 307
AutoFact: Os06g0489200 protein n=2 Tax=Oryza sativa RepID=Q67VW6_ORYSJ 7.0e-21
FL-Next: tr=Os06g0489200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: g patch domain-containing protein 1 2.17731e-24
Internal
sp_v2.0_unigene40549 SustainPine v2.0 307
AutoFact: G patch domain-containing protein 1 [Arabidopsis thaliana] dbj|BAC42755.1| unknown protein [Arabidopsis thaliana] gb|AAP40415.1| unknown protein [Arabidopsis thaliana] gb|AED93116.1| G patch domain-containing protein 1 [Arabidopsis thaliana] 1.0e-16
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: g patch domain-containing protein 1 6.50317e-20
Internal
sp_v2.0_unigene41858 SustainPine v2.0 299
AutoFact: G patch domain-containing protein 1 n=2 Tax=Arabidopsis RepID=Q8GXN9_ARATH 3.0e-19
FL-Next: tr=G patch domain-containing protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: g patch domain-containing protein 1 1.5629e-22
Internal
sp_v2.0_unigene43719 SustainPine v2.0 619
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 2.0e-29
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: 20-like protein 4.23164e-33
Internal
sp_v2.0_unigene43963 SustainPine v2.0 417
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNU3_RICCO 6.0e-24
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 2.79951e-27
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain