Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: SWAP/Surp

Term: IPR000061  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene46553 SustainPine v2.0 396
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H252_POPTR 5.0e-30
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 6.26027e-35
Internal
sp_v2.0_unigene49592 SustainPine v2.0 390
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 4.0e-38
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
C-terminus
sp_v2.0_unigene55996 SustainPine v2.0 116
AutoFact: putative U2-associated SR140 protein [Oryza sativa Japonica Group] 7.0e-08
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v2.0_unigene59117 SustainPine v2.0 296
AutoFact: DUF1777 multi-domain protein 6.0e-10
Coding
sp_v2.0_unigene59611 SustainPine v2.0 313
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: swap surp domain-containing protein 4.34597e-12
Internal
sp_v2.0_unigene60742 SustainPine v2.0 620
AutoFact: Cell division control protein 50 n=2 Tax=Andropogoneae RepID=B6TU52_MAIZE 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division control protein 50 0.0
C-terminus
sp_v2.0_unigene62041 SustainPine v2.0 373
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase 2.00111e-40
C-terminus
sp_v2.0_unigene62371 SustainPine v2.0 1178
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 6.0e-35
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: splicing factor 4-like protein 3.78351e-44
N-terminus
sp_v2.0_unigene68114 SustainPine v2.0 688
AutoFact: Cell division control protein 50 n=3 Tax=Andropogoneae RepID=B6T6G6_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division control protein 50 0.0
Internal
sp_v2.0_unigene68208 SustainPine v2.0 387
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: swap surp domain-containing protein 2.69929e-11
Internal
sp_v2.0_unigene70708 SustainPine v2.0 368
AutoFact: histone-lysine N-methyltransferase [Arabidopsis thaliana] ref|NP_974368.1| histone-lysine N-methyltransferase [Arabidopsis thaliana] dbj|BAB01232.1| unnamed protein product [Arabidopsis thaliana] gb|AAL07209.1| unknown protein [Arabidopsis thaliana] gb|AA 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 1.99071e-21
C-terminus
sp_v2.0_unigene72820 SustainPine v2.0 181
AutoFact: putative U2-associated SR140 protein [Oryza sativa Japonica Group] 5.0e-14
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: hypothetical protein VITISV_025939 [Vitis vinifera] 1.76982e-14
Internal
sp_v2.0_unigene78773 SustainPine v2.0 448
AutoFact: Arginine/serine rich splicing factor sf4/14, putative n=1 Tax=Ricinus communis RepID=B9RHH0_RICCO 2.0e-06
FL-Next: tr=Arginine/serine rich splicing factor sf4/14, putative; Ricinus communis (Castor bean). 0.0
Blast2go: arginine serine rich splicing factor sf4 5.00352e-07
Putative N-terminus
sp_v2.0_unigene79677 SustainPine v2.0 578
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 7.0e-30
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: swap surp domain-containing protein 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain