Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Chloride channel ClC-plant

Term: IPR002251  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene406 SustainPine v2.0 2217
AutoFact: chloride channel protein CLC-d [Arabidopsis thaliana] sp|P92943.2|CLCD_ARATH RecName: Full=Chloride channel protein CLC-d; Short=AtCLC-d gb|AED93540.1| chloride channel protein CLC-d [Arabidopsis thaliana] 0.0
FL-Next: sp=Chloride channel protein CLC-d; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chloride channel protein clc-d 0.0
Putative C-terminus
sp_v2.0_unigene660 SustainPine v2.0 3356
AutoFact: Cl-channel clc-7 n=2 Tax=Populus trichocarpa RepID=B9N0H5_POPTR 0.0
FL-Next: tr=Cl-channel clc-7; subsp. trichocarpa). 0.0
Blast2go: cl-channel clc-7 0.0
Complete
sp_v2.0_unigene6588 SustainPine v2.0 1965
AutoFact: Chloride channel protein n=1 Tax=Citrus trifoliata RepID=D5LM39_PONTR 0.0
FL-Next: sp=Chloride channel protein CLC-c; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cl-channel clc-7 0.0
C-terminus
sp_v2.0_unigene13215 SustainPine v2.0 1266
AutoFact: Cl-channel clc-7 (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HV75_POPTR 0.0
FL-Next: sp=Chloride channel protein CLC-d; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chloride channel protein clc-d 0.0
N-terminus
sp_v2.0_unigene14298 SustainPine v2.0 489
AutoFact: chloride channel protein [Dictyostelium discoideum AX4] sp|Q1ZXJ0.1|CLCD_DICDI RecName: Full=Chloride channel protein D gb|EAS66897.1| chloride channel protein [Dictyostelium discoideum AX4] 1.0e-23
FL-Next: sp=Chloride channel protein CLC-d; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chloride channel family 0.0
Internal
sp_v2.0_unigene35821 SustainPine v2.0 1133
AutoFact: CBS; Cl- channel, voltage gated; Twin-arginine translocation pathway signal [Medicago truncatula] 0.0
FL-Next: sp=Chloride channel protein CLC-c; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cl-channel clc-7 0.0
Putative N-terminus
sp_v2.0_unigene50494 SustainPine v2.0 227
AutoFact: Chloride channel protein n=1 Tax=Citrus trifoliata RepID=D5LM39_PONTR 6.0e-19
FL-Next: sp=Chloride channel protein CLC-c; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chloride channel 1.46406e-22
Internal
sp_v2.0_unigene64701 SustainPine v2.0 403
AutoFact: chloride channel protein CLC-b [Arabidopsis thaliana] sp|P92942.1|CLCB_ARATH RecName: Full=Chloride channel protein CLC-b; Short=AtCLC-b emb|CAA96058.1| CLC-b chloride channel protein [Arabidopsis thaliana] dbj|BAB01934.1| CLC-d chloride channel; anion ch 6.0e-15
FL-Next: sp=Chloride channel protein CLC-b; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cl-channel clc-7 1.56922e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain