Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Alpha tubulin

Term: IPR002452  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1281 SustainPine v2.0 2201
AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: major facilitator protein 0.0
Complete
sp_v2.0_unigene5560 SustainPine v2.0 1550
AutoFact: PREDICTED: similar to phosphatidylserine decarboxylase n=1 Tax=Vitis vinifera RepID=UPI0001984625 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: phosphatidylserine decarboxylase 0.0
C-terminus
sp_v2.0_unigene5836 SustainPine v2.0 679
AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrate and chloride transporter 0.0
C-terminus
sp_v2.0_unigene15911 SustainPine v2.0 1564
AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 1 0.0
C-terminus
sp_v2.0_unigene19025 SustainPine v2.0 1065
AutoFact: putative nodule-specific protein [Oryza sativa Japonica Group] gb|ABF99380.1| nodulin family protein, putative, expressed [Oryza sativa Japonica Group] gb|EAY92205.1| hypothetical protein OsI_13924 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100266758 0.0
Internal
sp_v2.0_unigene20150 SustainPine v2.0 657
AutoFact: Nodulin family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWD3_ARALL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nodulin family protein 0.0
Internal
sp_v2.0_unigene21206 SustainPine v2.0 2243
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: swap surp domain-containing protein 0.0
C-terminus
sp_v2.0_unigene22011 SustainPine v2.0 1272
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NYS4_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proteasome subunit beta type-5-a 0.0
Complete
sp_v2.0_unigene24946 SustainPine v2.0 1338
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 1 0.0
N-terminus
sp_v2.0_unigene25176 SustainPine v2.0 1183
AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 0.0
N-terminus
sp_v2.0_unigene25350 SustainPine v2.0 1963
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Blast2go: alpha tubulin 1 0.0
Complete
sp_v2.0_unigene27120 SustainPine v2.0 433
AutoFact: Unassigned protein
unknown
sp_v2.0_unigene27305 SustainPine v2.0 869
AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nodulin family protein 0.0
Putative C-terminus
sp_v2.0_unigene29986 SustainPine v2.0 504
AutoFact: Nodulin family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWD3_ARALL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nodulin family protein 0.0
Putative C-terminus
sp_v2.0_unigene41803 SustainPine v2.0 544
AutoFact: Tubulin alpha chain n=1 Tax=Euplotes vannus RepID=TBA_EUPVA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-tubulin 0.0
Internal
sp_v2.0_unigene54394 SustainPine v2.0 371
AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAC98454.1| nodulin-like protein [Arabidopsis thaliana] gb|AAL14413.1| At2g28120/F24D13.9 [Arabidopsis thaliana] gb|AAL32615.1| nodulin-like protein [Arabidopsis thaliana] gb|AAM13326.1| nodulin-like pro 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: major facilitator protein 0.0
Internal
sp_v2.0_unigene57360 SustainPine v2.0 146
AutoFact: Nodulin family protein, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q10F41_ORYSJ 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nodulin family expressed 5.64176e-17
C-terminus
sp_v2.0_unigene57574 SustainPine v2.0 401
AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 7.00649e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nodule-specific protein nlj70 0.0
Putative C-terminus
sp_v2.0_unigene58645 SustainPine v2.0 241
AutoFact: Tubulin alpha-1 chain n=5 Tax=Coelomata RepID=F4WDI4_9HYME 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 0.0
Putative C-terminus
sp_v2.0_unigene59611 SustainPine v2.0 313
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: swap surp domain-containing protein 4.34597e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain