Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA-binding protein Lupus La

Term: IPR006630  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3484 SustainPine v2.0 1231
AutoFact: Peroxidase 10, putative n=1 Tax=Ricinus communis RepID=B9S775_RICCO 0.0
FL-Next: tr=Peroxidase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene4560 SustainPine v2.0 1098
AutoFact: Peroxidase 10, putative n=1 Tax=Ricinus communis RepID=B9S775_RICCO 0.0
FL-Next: tr=Properoxidase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: peroxidase 10-like 0.0
C-terminus
sp_v2.0_unigene6063 SustainPine v2.0 1775
AutoFact: winged-helix DNA-binding transcription factor family protein [Arabidopsis thaliana] gb|AAM10313.1| AT5g66100/K2A18_18 [Arabidopsis thaliana] gb|AAN31109.1| At5g66100/K2A18_18 [Arabidopsis thaliana] gb|AED98159.1| winged-helix DNA-binding transcription fac 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 9.83978e-38
N-terminus
sp_v2.0_unigene6471 SustainPine v2.0 2094
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene7321 SustainPine v2.0 1716
AutoFact: La protein 1 [Arabidopsis thaliana] gb|AAL07086.1| unknown protein [Arabidopsis thaliana] gb|AEE86109.1| La protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: la protein 1 0.0
Complete
sp_v2.0_unigene10050 SustainPine v2.0 785
AutoFact: DUF1431 multi-domain protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 2.80566e-11
C-terminus
sp_v2.0_unigene10900 SustainPine v2.0 4377
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene16381 SustainPine v2.0 2160
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene19523 SustainPine v2.0 1694
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 6.0e-18
FL-Next: tr=Lupus la ribonucleoprotein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: atp synthase subunit a chloroplastic 5.02155e-22
Internal
sp_v2.0_unigene21253 SustainPine v2.0 2165
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9SSZ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
Complete
sp_v2.0_unigene27324 SustainPine v2.0 1347
AutoFact: Peroxidase 10, putative n=1 Tax=Ricinus communis RepID=B9S775_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxidase 10-like 0.0
Complete
sp_v2.0_unigene27697 SustainPine v2.0 2453
AutoFact: RNA-binding protein [Arabidopsis thaliana] gb|AAK52994.1|AF375410_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK56266.1|AF367277_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK06847.1| VirF-interacting protein FIP1 [Arabidopsis thaliana] gb|AAL0708 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
Complete
sp_v2.0_unigene31255 SustainPine v2.0 641
AutoFact: RNA methylase HUA ENHANCER 1 [Arabidopsis thaliana] ref|NP_001190782.1| RNA methylase HUA ENHANCER 1 [Arabidopsis thaliana] sp|Q9C5Q8.1|HEN1_ARATH RecName: Full=Small RNA 2'-O-methyltransferase; AltName: Full=Protein CORYMBOSA 2; AltName: Full=Protein HUA 7.00649e-44
FL-Next: sp=Small RNA 2'-O-methyltransferase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: small rna 2 -o-methyltransferase-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain