Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA-processing protein, HAT helix

Term: IPR003107  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene19342 SustainPine v2.0 2974
AutoFact: PREDICTED: similar to binding n=1 Tax=Vitis vinifera RepID=UPI00019836A8 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat-containing protein 0.0
Complete
sp_v2.0_unigene20788 SustainPine v2.0 627
AutoFact: RelA-SpoT like protein RSH4 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp pyrophosphokinase 0.0
Internal
sp_v2.0_unigene20922 SustainPine v2.0 1714
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: protein 1.47226e-35
Complete
sp_v2.0_unigene24681 SustainPine v2.0 2025
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpr domain protein 0.0
Complete
sp_v2.0_unigene24834 SustainPine v2.0 598
AutoFact: transcription-coupled DNA repair protein-related; K12867 pre-mRNA-splicing factor SYF1 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pre-mrna-splicing factor syf1-like 0.0
N-terminus
sp_v2.0_unigene24866 SustainPine v2.0 2948
AutoFact: Hepatocellular carcinoma-associated antigen, putative n=1 Tax=Ricinus communis RepID=B9RXI9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u3 small nucleolar rna-associated protein 6 homolog 0.0
Complete
sp_v2.0_unigene25895 SustainPine v2.0 326
AutoFact: Unassigned protein
FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Internal
sp_v2.0_unigene25922 SustainPine v2.0 892
AutoFact: Squamous cell carcinoma antigen recognized by T-cells, putative n=1 Tax=Ricinus communis RepID=B9SPA3_RICCO 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamous cell carcinoma antigen recognized by t-cells 3-like 4.8611e-41
C-terminus
sp_v2.0_unigene26961 SustainPine v2.0 3464
AutoFact: Pre-mRNA-processing protein prp39, putative n=1 Tax=Ricinus communis RepID=B9SKM7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene30524 SustainPine v2.0 561
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: upf0614 protein c14orf102-like 0.0
Putative Complete
sp_v2.0_unigene30669 SustainPine v2.0 781
AutoFact: Squamous cell carcinoma antigen recognized by T-cells, putative n=1 Tax=Ricinus communis RepID=B9SPA3_RICCO 0.0
FL-Next: tr=Squamous cell carcinoma antigen recognized by T-cells, putative; Ricinus communis (Castor bean). 0.0
Blast2go: squamous cell carcinoma antigen recognized by t-cells 3-like 0.0
N-terminus
sp_v2.0_unigene32451 SustainPine v2.0 1974
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat domain-containing protein 0.0
Putative Complete
sp_v2.0_unigene34775 SustainPine v2.0 778
AutoFact: putative pre-rRNA processing protein, 5' partial [Arabidopsis thaliana] 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein rrp5 homolog 9.86014e-33
N-terminus
sp_v2.0_unigene36113 SustainPine v2.0 838
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 6.90875e-32
C-terminus
sp_v2.0_unigene37053 SustainPine v2.0 417
AutoFact: Plant RNA cleavage stimulation factor, putative n=1 Tax=Ricinus communis RepID=B9S078_RICCO 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cleavage stimulation factor subunit 3 0.0
N-terminus
sp_v2.0_unigene38224 SustainPine v2.0 581
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: upf0614 protein c14orf102-like 3.78329e-36
Internal
sp_v2.0_unigene39051 SustainPine v2.0 379
AutoFact: Squamous cell carcinoma antigen recognized by T-cells, putative n=1 Tax=Ricinus communis RepID=B9SPA3_RICCO 2.0e-14
FL-Next: tr=Squamous cell carcinoma antigen recognized by T-cells, putative; Ricinus communis (Castor bean). 0.0
Blast2go: squamous cell carcinoma antigen recognized by t-cells 3-like 1.17779e-17
Internal
sp_v2.0_unigene39229 SustainPine v2.0 584
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: squamous cell carcinoma antigen recognized by t-cells 3-like 0.0
Internal
sp_v2.0_unigene41649 SustainPine v2.0 449
AutoFact: DUF946 domain containing protein 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: pre-mrna processing protein expressed 0.0
Internal
sp_v2.0_unigene45135 SustainPine v2.0 569
AutoFact: DUF946 domain containing protein 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pre-mrna processing protein expressed 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain