Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, CW-type

Term: IPR011124  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene25293 SustainPine v2.0 653
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: sp=ATP-dependent helicase BRM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atpase splayed 0.0
Internal
sp_v2.0_unigene25407 SustainPine v2.0 1994
AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 0.0
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl-cpg-binding domain protein 02 0.0
Complete
sp_v2.0_unigene29075 SustainPine v2.0 877
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GWX1_POPTR 1.0e-10
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g54460-like 8.54859e-13
Putative C-terminus
sp_v2.0_unigene33466 SustainPine v2.0 634
AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 6.0e-30
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl-cpg-binding domain protein 02 1.41321e-41
Putative N-terminus
sp_v2.0_unigene37046 SustainPine v2.0 722
AutoFact: histone-lysine N-methyltransferase ATX1 [Arabidopsis thaliana] sp|Q9C5X4.2|ATX1_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX1; AltName: Full=Protein SET DOMAIN GROUP 27; AltName: Full=Trithorax-homolog protein 1; Short=TRX-homolog protein 1 0.0
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana GN=ATX1 0.0
Blast2go: histone-lysine n-methyltransferase atx2-like 0.0
Internal
sp_v2.0_unigene37963 SustainPine v2.0 467
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 0.0
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g54460-like 0.0
Internal
sp_v2.0_unigene38738 SustainPine v2.0 521
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 0.0
FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
Blast2go: b3 domain-containing protein os07g0679700-like 0.0
Internal
sp_v2.0_unigene40763 SustainPine v2.0 470
AutoFact: zf-CW domain containing protein 9.0e-11
FL-Next: sp=B3 domain-containing protein Os07g0563300; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene41068 SustainPine v2.0 346
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_123.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7UBN9_VITVI 1.0e-28
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g54460-like 1.06415e-31
Internal
sp_v2.0_unigene41234 SustainPine v2.0 421
AutoFact: histone-lysine N-methyltransferase SETD2 [Arabidopsis thaliana] gb|AEE35961.1| histone-lysine N-methyltransferase SETD2 [Arabidopsis thaliana] 8.0e-33
FL-Next: sp=Histone-lysine N-methyltransferase ASHH2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: set domain protein 3.36312e-44
Internal
sp_v2.0_unigene43603 SustainPine v2.0 398
AutoFact: putative methyl-binding domain (MBD108) protein [Brachypodium sylvaticum] 1.0e-13
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 2.02333e-21
Internal
sp_v2.0_unigene45867 SustainPine v2.0 516
AutoFact: RecName: Full=Histone-lysine N-methyltransferase ASHH2; AltName: Full=ASH1 homolog 2; AltName: Full=H3-K4-HMTase; AltName: Full=Histone H3-K36 methyltransferase 8; Short=H3-K36-HMTase 8; AltName: Full=Protein EARLY FLOWERING IN SHORT DAYS; AltName: Full=P 2.0e-11
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ASHH2 OS=Arabidopsis thaliana GN=ASHH2 0.0
Blast2go: set domain protein 2.6826e-21
Internal
sp_v2.0_unigene46101 SustainPine v2.0 481
AutoFact: SET domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IA87_POPTR 0.0
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana GN=ATX1 0.0
Blast2go: set domain protein 0.0
Internal
sp_v2.0_unigene47034 SustainPine v2.0 540
AutoFact: B3 domain-containing transcription repressor VAL2 [Arabidopsis thaliana] sp|Q5CCK4.1|VAL2_ARATH RecName: Full=B3 domain-containing transcription repressor VAL2; AltName: Full=Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE-LIKE 1; AltName: Full=Protein V 2.0e-18
FL-Next: sp=B3 domain-containing protein Os07g0679700; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: b3 domain-containing protein 2.7668e-23
N-terminus
sp_v2.0_unigene48167 SustainPine v2.0 272
AutoFact: [R] COG2940 Proteins containing SET domain 4.0e-17
FL-Next: sp=Histone-lysine N-methyltransferase ASHH2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: set domain protein 8.46384e-43
Internal
sp_v2.0_unigene56880 SustainPine v2.0 283
AutoFact: Unassigned protein
FL-Next: sp=B3 domain-containing protein Os07g0679700; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: b3 domain-containing protein 1.10908e-16
Internal
sp_v2.0_unigene59188 SustainPine v2.0 302
AutoFact: Unassigned protein
FL-Next: sp=Histone-lysine N-methyltransferase ASHH2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: set domain protein 4.71883e-28
Internal
sp_v2.0_unigene59392 SustainPine v2.0 762
AutoFact: histone-lysine N-methyltransferase SETD2 [Arabidopsis thaliana] gb|AEE35961.1| histone-lysine N-methyltransferase SETD2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: set domain protein 0.0
Putative C-terminus
sp_v2.0_unigene64272 SustainPine v2.0 552
AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 5.0e-17
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl-cpg-binding domain protein 02 2.03775e-24
Putative C-terminus
sp_v2.0_unigene65213 SustainPine v2.0 460
AutoFact: B3 domain-containing transcription repressor VAL2 [Arabidopsis thaliana] sp|Q5CCK4.1|VAL2_ARATH RecName: Full=B3 domain-containing transcription repressor VAL2; AltName: Full=Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE-LIKE 1; AltName: Full=Protein V 5.0e-17
FL-Next: Isoform 2 of B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL2 0.0
Blast2go: b3 domain-containing transcription repressor val2 9.38083e-23
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain