Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: C-type lectin, conserved site

Term: IPR018378  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene65173 SustainPine v2.0 574
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9ST45_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene65376 SustainPine v2.0 297
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10NE5_ORYSJ 1.0e-26
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 1.03321e-32
Putative C-terminus
sp_v2.0_unigene66555 SustainPine v2.0 225
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Medicago truncatula RepID=A2Q5V4_MEDTR 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 6.97311e-15
Internal
sp_v2.0_unigene66887 SustainPine v2.0 478
AutoFact: vesicle-associated membrane protein 727 [Arabidopsis thaliana] ref|NP_001078283.1| vesicle-associated membrane protein 727 [Arabidopsis thaliana] sp|Q9M376.1|VA727_ARATH RecName: Full=Vesicle-associated membrane protein 727; Short=AtVAMP727 emb|CAB71004.1 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated membrane protein 727 isoform 1 3.29376e-13
C-terminus
sp_v2.0_unigene67437 SustainPine v2.0 416
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T7E9_RICCO 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 3.83956e-43
Internal
sp_v2.0_unigene68458 SustainPine v2.0 511
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated membrane 2.8026e-45
N-terminus
sp_v2.0_unigene69774 SustainPine v2.0 456
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein binding 8.13557e-18
Internal
sp_v2.0_unigene74599 SustainPine v2.0 381
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S3M3_RICCO 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene77004 SustainPine v2.0 1017
AutoFact: ring zinc finger protein-like protein [Oryza sativa Japonica Group] 8.99999e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase at4g11680-like isoform 2 0.0
N-terminus
sp_v2.0_unigene77231 SustainPine v2.0 517
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 1.4013e-45
N-terminus
sp_v2.0_unigene77458 SustainPine v2.0 418
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
sp_v2.0_unigene78053 SustainPine v2.0 323
AutoFact: Putative Zea mays retrotransposon Opie-2 n=2 Tax=Oryza sativa Japonica Group RepID=Q8H7T1_ORYSJ 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 4.64832e-24
Internal
sp_v2.0_unigene78156 SustainPine v2.0 305
AutoFact: Reverse transcriptase (RNA-dependent DNA polymerase), putative n=1 Tax=Medicago truncatula RepID=Q1S5J6_MEDTR 2.0e-18
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 7.55313e-22
Internal
sp_v2.0_unigene81000 SustainPine v2.0 388
AutoFact: vesicle-associated membrane protein 721 [Arabidopsis thaliana] dbj|BAD44122.1| putative vesicle-associated membrane protein, synaptobrevin 7B [Arabidopsis thaliana] gb|AEE27739.1| vesicle-associated membrane protein 721 [Arabidopsis thaliana] 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated membrane protein 725 0.0
C-terminus
sp_v2.0_unigene85931 SustainPine v2.0 348
AutoFact: protein kinase-like protein / C-type lectin domain-containing protein [Arabidopsis thaliana] sp|Q9C823.1|Y1523_ARATH RecName: Full=C-type lectin receptor-like tyrosine-protein kinase At1g52310; Flags: Precursor gb|AAG51547.1|AC037424_12 protein kinase, pu 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c-type lectin receptor-like tyrosine-protein kinase at1g52310-like 3.31133e-23
Internal
sp_v2.0_unigene85971 SustainPine v2.0 537
AutoFact: RING-finger domain protein [Zinnia violacea] 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.53765e-37
Internal
sp_v2.0_unigene91563 SustainPine v2.0 308
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 3.62714e-28
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain