Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA-directed DNA polymerase, family B

Term: IPR006172  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene416 SustainPine v2.0 2965
AutoFact: DNA polymerase delta catalytic subunit n=6 Tax=Poaceae RepID=DPOD1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase delta subunit 1 0.0
Complete
sp_v2.0_unigene9181 SustainPine v2.0 1334
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna polymerase epsilon catalytic subunit a 0.0
C-terminus
sp_v2.0_unigene11374 SustainPine v2.0 2101
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha catalytic 0.0
C-terminus
sp_v2.0_unigene11730 SustainPine v2.0 1159
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna polymerase epsilon catalytic subunit a 0.0
Internal
sp_v2.0_unigene11908 SustainPine v2.0 936
AutoFact: DNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HHA9_POPTR 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha catalytic subunit 0.0
Internal
sp_v2.0_unigene20401 SustainPine v2.0 412
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase zeta catalytic 3.9962e-26
C-terminus
sp_v2.0_unigene20558 SustainPine v2.0 353
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RGR4_RICCO 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box atp-dependent rna 1.93707e-09
Internal
sp_v2.0_unigene26827 SustainPine v2.0 1041
AutoFact: DNA polymerase delta catalytic subunit n=6 Tax=Poaceae RepID=DPOD1_ORYSJ 0.0
FL-Next: sp=DNA polymerase delta catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase delta subunit 1 0.0
Internal
sp_v2.0_unigene29935 SustainPine v2.0 1034
AutoFact: putative ethylene-responsive RNA helicase [Oryza sativa Japonica Group] 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box atp-dependent rna 8.10105e-41
Putative C-terminus
sp_v2.0_unigene30366 SustainPine v2.0 626
AutoFact: DNA polymerase n=2 Tax=Andropogoneae RepID=C5XR76_SORBI 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha catalytic 0.0
Internal
sp_v2.0_unigene33309 SustainPine v2.0 775
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna polymerase zeta catalytic 5.70595e-41
Internal
sp_v2.0_unigene35953 SustainPine v2.0 792
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase zeta catalytic 0.0
Putative C-terminus
sp_v2.0_unigene38443 SustainPine v2.0 688
AutoFact: DNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=D7U4B5_VITVI 0.0
FL-Next: sp=DNA polymerase delta catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase delta subunit 1 0.0
Putative N-terminus
sp_v2.0_unigene38570 SustainPine v2.0 361
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase zeta catalytic 2.37395e-38
Internal
sp_v2.0_unigene40750 SustainPine v2.0 598
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SVW3_VITVI 1.0e-17
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha catalytic 2.15412e-19
Internal
sp_v2.0_unigene42925 SustainPine v2.0 443
AutoFact: DNA polymerase n=2 Tax=Oryza sativa RepID=Q6K777_ORYSJ 0.0
FL-Next: sp=DNA polymerase; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: dna polymerase epsilon catalytic subunit a 0.0
Internal
sp_v2.0_unigene46957 SustainPine v2.0 397
AutoFact: DNA polymerase n=1 Tax=Sorghum bicolor RepID=C5XSM7_SORBI 0.0
FL-Next: sp=DNA polymerase; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: dna polymerase epsilon subunit 1 0.0
Internal
sp_v2.0_unigene50548 SustainPine v2.0 347
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U238_VITVI 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna polymerase zeta subunit 1.33015e-28
Internal
sp_v2.0_unigene58081 SustainPine v2.0 258
AutoFact: DNA polymerase n=3 Tax=Selaginella moellendorffii RepID=D8RZN4_SELML 3.0e-25
FL-Next: sp=DNA polymerase delta catalytic subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna polymerase zeta subunit 1.34355e-30
Internal
sp_v2.0_unigene58236 SustainPine v2.0 433
AutoFact: Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] gb|AEE33177.1| Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] 1.0e-23
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zn-finger in ran binding domain-containing protein 2.94666e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain