Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: DNA topoisomerase, type IIA, subunit A/C-terminal

Term: IPR002205  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene693 SustainPine v2.0 3730
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna topoisomerase ii 0.0
N-terminus
sp_v2.0_unigene3951 SustainPine v2.0 1841
AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna gyrase subunit a 0.0
Complete
sp_v2.0_unigene18027 SustainPine v2.0 1540
AutoFact: DNA topoisomerase II, putative n=1 Tax=Ricinus communis RepID=B9RVN3_RICCO 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna topoisomerase 0.0
C-terminus
sp_v2.0_unigene29326 SustainPine v2.0 1828
AutoFact: DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRA_NICBE 0.0
FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
Blast2go: dna gyrase subunit a 0.0
N-terminus
sp_v2.0_unigene34589 SustainPine v2.0 462
AutoFact: DNA gyrase subunit A [Arabidopsis thaliana] sp|Q9CAF6.2|GYRA_ARATH RecName: Full=Probable DNA gyrase subunit A, chloroplastic/mitochondrial; Flags: Precursor gb|AEE74943.1| DNA gyrase subunit A [Arabidopsis thaliana] 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna gyrase subunit a 3.19216e-41
Putative C-terminus
sp_v2.0_unigene56798 SustainPine v2.0 259
AutoFact: DNA topoisomerase 2 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RWX5_PHYPA 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna topoisomerase ii 7.23238e-41
N-terminus
sp_v2.0_unigene75411 SustainPine v2.0 344
AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna gyrase subunit a 6.28432e-35
C-terminus
sp_v2.0_unigene85937 SustainPine v2.0 329
AutoFact: DNA gyrase subunit A, chloroplast/mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9SK06_RICCO 7.0e-28
FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
Blast2go: dna gyrase subunit a 1.91432e-35
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain