Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Excinuclease ABC, C subunit, N-terminal

Term: IPR000305  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3004 SustainPine v2.0 2612
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene5425 SustainPine v2.0 512
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 2.32003e-38
Internal
sp_v2.0_unigene7734 SustainPine v2.0 1860
AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01940 t7b11_20 0.0
Complete
sp_v2.0_unigene8903 SustainPine v2.0 1225
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene11385 SustainPine v2.0 1291
AutoFact: holiday junction resolvase, S1x1p, URI domain nuclease 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene11470 SustainPine v2.0 1496
AutoFact: 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] dbj|BAB10682.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] gb|AAL67070.1| putative 2-oxoglutarate dehydrogenase E1 component [Arabidopsis thaliana] gb|AAM20281.1| put 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: 2-oxoglutarate e1 component 0.0
Internal
sp_v2.0_unigene35193 SustainPine v2.0 907
AutoFact: GIY-YIG catalytic domain-containing protein [Arabidopsis thaliana] dbj|BAD43152.1| hypothetical protein [Arabidopsis thaliana] dbj|BAD43156.1| hypothetical protein [Arabidopsis thaliana] dbj|BAD44370.1| hypothetical protein [Arabidopsis thaliana] gb|AAY56 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene35311 SustainPine v2.0 390
AutoFact: serine/threonine-protein kinase-like protein [Arabidopsis thaliana] sp|Q9SV05.1|CCR35_ARATH RecName: Full=Serine/threonine-protein kinase-like protein At3g51990; AltName: Full=CRINKLY 4-related kinase; Flags: Precursor emb|CAB41319.1| putative serine/thre 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase-like protein at1g28390-like 0.0
Internal
sp_v2.0_unigene36053 SustainPine v2.0 375
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 3.77904e-17
N-terminus
sp_v2.0_unigene37566 SustainPine v2.0 308
AutoFact: DNA mismatch repair protein n=1 Tax=Cucumis sativus RepID=B3U2A3_CUCSA 5.0e-24
FL-Next: tr=DNA mismatch repair protein; Cucumis sativus (Cucumber). 0.0
Blast2go: dna mismatch repair protein 5.17035e-28
Putative C-terminus
sp_v2.0_unigene43935 SustainPine v2.0 440
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna mismatch repair protein 9.2333e-32
Internal
sp_v2.0_unigene57036 SustainPine v2.0 641
AutoFact: DNA mismatch repair protein (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1XBQ6_SOLLC 0.0
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna mismatch repair protein 0.0
Internal
sp_v2.0_unigene58186 SustainPine v2.0 419
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SQS1_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein 0.0
Internal
sp_v2.0_unigene59204 SustainPine v2.0 435
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna mismatch repair protein 0.0
Internal
sp_v2.0_unigene75910 SustainPine v2.0 317
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.4224e-14
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain