Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: K Homology domain

Term: IPR004087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene25878 SustainPine v2.0 871
AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana] gb|AAP37761.1| At5g53060 [Arabidopsis thaliana] gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana] 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kh domain-containing protein at4g18375-like 0.0
C-terminus
sp_v2.0_unigene26004 SustainPine v2.0 3905
AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64022.1| unknown protein [Arabidopsis thaliana] gb|AAM44907.1| unknown protein [Arabidopsis thaliana] gb|AED95351.1| RNA-b 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene26021 SustainPine v2.0 1800
AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] sp|Q8GYR4.1|QKIL4_ARATH RecName: Full=KH domain-containing protein At3g08620; AltName: Full=Quaking-like protein 4 dbj|BAC42103.1| unknown protein [Arabidopsis thaliana] gb|AEE74654.1| RNA-bi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kh domain-containing protein at2g38610-like 0.0
Complete
sp_v2.0_unigene26358 SustainPine v2.0 1927
AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] sp|Q0WLR1.1|QKIL1_ARATH RecName: Full=KH domain-containing protein At4g26480; AltName: Full=Quaking-like protein 1 dbj|BAF01946.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85206.1| R 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding kh domain-containing protein 0.0
Complete
sp_v2.0_unigene26727 SustainPine v2.0 612
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
sp_v2.0_unigene26832 SustainPine v2.0 2856
AutoFact: upstream element-binding protein [Arabidopsis thaliana] gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana] gb|AAM15002.1| unknown protein [Arabidopsis thaliana] gb|AAM15045.1| unknown protein [Arabidopsis thaliana] dbj|BAE98938.1| hypothetical protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: upstream element-binding protein 0.0
Complete
sp_v2.0_unigene27029 SustainPine v2.0 1930
AutoFact: root-specific metal transporter [Solanum lycopersicum] 0.0
FL-Next: sp=Metal transporter Nramp1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: metal transporter 0.0
Complete
sp_v2.0_unigene27919 SustainPine v2.0 1517
AutoFact: Drosophila melanogaster CG8797 gene product-related (Fragment) n=2 Tax=Eukaryota RepID=Q7REV3_PLAYO 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.28701e-14
Putative Complete
sp_v2.0_unigene28196 SustainPine v2.0 1947
AutoFact: Callose synthase 3 n=2 Tax=Arabidopsis thaliana RepID=CALS3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: callose synthase 0.0
Complete
sp_v2.0_unigene28533 SustainPine v2.0 1114
AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl4 0.0
Complete
sp_v2.0_unigene28544 SustainPine v2.0 887
AutoFact: Glucan synthase like 3 n=2 Tax=Selaginella moellendorffii RepID=D8QQF0_SELML 0.0
FL-Next: sp=Callose synthase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glucan synthase like 3 0.0
Internal
sp_v2.0_unigene28640 SustainPine v2.0 923
AutoFact: protein RIK [Zea mays] sp|Q32SG5.1|RIK_MAIZE RecName: Full=Protein RIK; AltName: Full=Rough sheath 2-interacting KH domain protein; Short=RS2-interacting KH domain protein gb|AAY24682.1| ROUGH SHEATH2-interacting KH-domain protein [Zea mays] 0.0
FL-Next: sp=Protein RIK; Zea mays (Maize). 0.0
Blast2go: protein rik-like 0.0
Internal
sp_v2.0_unigene28671 SustainPine v2.0 2141
AutoFact: Callose synthase 3 n=2 Tax=Arabidopsis thaliana RepID=CALS3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: callose synthase 0.0
Complete
sp_v2.0_unigene28773 SustainPine v2.0 424
AutoFact: 1,3-beta-glucan synthase component-like [Oryza sativa Japonica Group] dbj|BAC01168.1| 1,3-beta-glucan synthase component-like [Oryza sativa Japonica Group] 1.0e-39
FL-Next: sp=Callose synthase 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 11-like 0.0
Internal
sp_v2.0_unigene29317 SustainPine v2.0 715
AutoFact: ATP-dependant RNA helicase [Plasmodium vivax SaI-1] gb|EDL44982.1| ATP-dependant RNA helicase, putative [Plasmodium vivax] 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna helicase dhx8 0.0
N-terminus
sp_v2.0_unigene29383 SustainPine v2.0 1078
AutoFact: KH_1 domain containing protein 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene30059 SustainPine v2.0 589
AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 0.0
Internal
sp_v2.0_unigene30128 SustainPine v2.0 454
AutoFact: Glycosyl transferase, family 48 [Medicago truncatula] 0.0
FL-Next: sp=Callose synthase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 0.0
Internal
sp_v2.0_unigene30275 SustainPine v2.0 465
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.25554e-40
Internal
sp_v2.0_unigene32159 SustainPine v2.0 589
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain