Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: K Homology domain

Term: IPR004087  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene69446 SustainPine v2.0 592
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana] gb|AAP37761.1| At5g53060 [Arabidopsis thaliana] gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana] 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kh domain-containing protein at4g18375-like 0.0
Putative N-terminus
sp_v2.0_unigene69667 SustainPine v2.0 471
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
sp_v2.0_unigene69854 SustainPine v2.0 469
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.05951e-36
C-terminus
sp_v2.0_unigene70029 SustainPine v2.0 413
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R9V5_RICCO 3.0e-34
• FL-Next: tr=Zinc finger protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: splicing factor 1 2.34476e-39
Internal
sp_v2.0_unigene70297 SustainPine v2.0 256
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U8_CYCRE 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 7.27468e-38
Internal
sp_v2.0_unigene70400 SustainPine v2.0 473
• AutoFact: 3'-5' exonuclease domain-containing protein-like [Solanum tuberosum] 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3 -5 exonuclease and kh-i domain-containing protein 3.64451e-30
Putative C-terminus
sp_v2.0_unigene70587 SustainPine v2.0 401
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v2.0_unigene70969 SustainPine v2.0 255
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 8.93124e-18
C-terminus
sp_v2.0_unigene72194 SustainPine v2.0 212
• AutoFact: Pentatricopeptide repeat domain containing protein, putative [Solanum demissum] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 6.70649e-17
C-terminus
sp_v2.0_unigene73160 SustainPine v2.0 231
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at4g33990-like 6.04252e-24
C-terminus
sp_v2.0_unigene73768 SustainPine v2.0 383
• AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
sp_v2.0_unigene74480 SustainPine v2.0 324
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v2.0_unigene74603 SustainPine v2.0 353
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger ccch domain-containing protein 14-like 1.56256e-16
Internal
sp_v2.0_unigene75055 SustainPine v2.0 287
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein loc100278213 1.36602e-38
C-terminus
sp_v2.0_unigene75794 SustainPine v2.0 301
• AutoFact: WS01019.B21_H16 SS-R-N-A-11 Picea sitchensis cDNA clone WS01019_H16 3', mRNA sequence. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 1.5612e-38
C-terminus
sp_v2.0_unigene75848 SustainPine v2.0 296
• AutoFact: glucan synthase-like protein [Arabidopsis thaliana] 5.0e-20
• FL-Next: sp=Putative callose synthase 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: glucan synthase like 4 1.83378e-26
Internal
sp_v2.0_unigene76830 SustainPine v2.0 356
• AutoFact: Pentatricopeptide, putative n=1 Tax=Oryza sativa Japonica Group RepID=Q10K51_ORYSJ 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at4g33990-like 4.81098e-30
C-terminus
sp_v2.0_unigene77001 SustainPine v2.0 1338
• AutoFact: 3'-5' exonuclease domain-containing protein-like [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3 -5 exonuclease and kh-i domain-containing protein 0.0
Putative Complete
sp_v2.0_unigene77157 SustainPine v2.0 427
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dyw9 protein 2.32037e-31
C-terminus
sp_v2.0_unigene77411 SustainPine v2.0 428
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain