|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v2.0_unigene604
|
SustainPine v2.0
|
1271
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: protein rrp5 homolog
|
0.0
|
|
C-terminus
|
|
sp_v2.0_unigene1078
|
SustainPine v2.0
|
1786
|
|
• AutoFact: S1 RNA-binding domain-containing protein [Arabidopsis thaliana] gb|AAK76665.1| putative heat shock factor protein hsf8 [Arabidopsis thaliana] gb|AAN71967.1| putative heat shock factor protein hsf8 [Arabidopsis thaliana] dbj|BAH30290.1| hypothetical protei
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: s1 rna-binding domain-containing protein
|
0.0
|
|
Putative Complete
|
|
sp_v2.0_unigene1571
|
SustainPine v2.0
|
2603
|
|
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase
|
0.0
|
|
Putative N-terminus
|
|
sp_v2.0_unigene2401
|
SustainPine v2.0
|
2539
|
|
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like
|
0.0
|
|
Putative Complete
|
|
sp_v2.0_unigene2629
|
SustainPine v2.0
|
1312
|
|
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO
|
5.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like
|
3.90336e-34
|
|
Putative C-terminus
|
|
sp_v2.0_unigene2757
|
SustainPine v2.0
|
1042
|
|
• AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: polyribonucleotide nucleotidyltransferase
|
0.0
|
|
Putative C-terminus
|
|
sp_v2.0_unigene3257
|
SustainPine v2.0
|
1363
|
|
• AutoFact: elongation factor Ts family protein [Arabidopsis thaliana] emb|CAB43920.1| putative protein [Arabidopsis thaliana] emb|CAB79664.1| putative protein [Arabidopsis thaliana] gb|AAL10483.1| AT4g29060/F19B15_90 [Arabidopsis thaliana] gb|AEE85580.1| elongation
|
0.0
|
|
• FL-Next: sp=Elongation factor Ts, chloroplastic; Rhodomonas salina (Cryptomonas salina). Plastid; Chloroplast.
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene3311
|
SustainPine v2.0
|
1245
|
|
• AutoFact: small subunit ribosomal protein S1 [Arabidopsis thaliana] gb|AAF43225.1|AC012654_9 Contains S1 RNA binding domain PF|00575. EST gb|AI997850 comes from this gene [Arabidopsis thaliana] gb|AEE35223.1| small subunit ribosomal protein S1 [Arabidopsis thaliana
|
5.04467e-44
|
|
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Putative N-terminus
|
|
sp_v2.0_unigene3744
|
SustainPine v2.0
|
1856
|
|
• AutoFact: chloroplast polyprotein of elongation factor Ts precursor [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
sp_v2.0_unigene4366
|
SustainPine v2.0
|
885
|
|
• AutoFact: ribosomal protein S1-like RNA-binding domain-containing protein [Arabidopsis thaliana] dbj|BAB01847.1| unnamed protein product [Arabidopsis thaliana] gb|AAK83625.1| AT3g23700/MYM9_3 [Arabidopsis thaliana] gb|AAM98102.1| At3g23700/MYM9_3 [Arabidopsis thali
|
1.99965e-42
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
sp_v2.0_unigene5326
|
SustainPine v2.0
|
1275
|
|
• AutoFact: exoribonuclease-like [Oryza sativa Japonica Group] gb|EEC74235.1| hypothetical protein OsI_09429 [Oryza sativa Indica Group] gb|EEE58039.1| hypothetical protein OsJ_08863 [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: exosome complex component csl4
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene5495
|
SustainPine v2.0
|
1047
|
|
• AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop
|
3.0e-40
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Blast2go: polyribonucleotide nucleotidyltransferase
|
4.2039e-45
|
|
Putative N-terminus
|
|
sp_v2.0_unigene5644
|
SustainPine v2.0
|
602
|
|
• AutoFact: Polynucleotide phosphorylase n=1 Tax=Pisum sativum RepID=O24288_PEA
|
0.0
|
|
• FL-Next: tr=Polynucleotide phosphorylase; Pisum sativum (Garden pea).
|
0.0
|
|
• Blast2go: polynucleotide phosphorylase
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene7094
|
SustainPine v2.0
|
1919
|
|
• AutoFact: [J] COG1097 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain)
|
1.0e-35
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: exosome complex component rrp40
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene8201
|
SustainPine v2.0
|
487
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: unknown [Picea sitchensis]
|
3.35577e-30
|
|
N-terminus
|
|
sp_v2.0_unigene10964
|
SustainPine v2.0
|
1026
|
|
• AutoFact: putative RNA helicase [Oryza sativa Japonica Group]
|
1.0e-32
|
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like
|
1.19185e-40
|
|
N-terminus
|
|
sp_v2.0_unigene11283
|
SustainPine v2.0
|
753
|
|
• AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase prp16-like
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene11527
|
SustainPine v2.0
|
1201
|
|
• AutoFact: putative RNA helicase [Oryza sativa Japonica Group] dbj|BAD35820.1| putative RNA helicase [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: atp-dependent rna helicase dhx8
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene13252
|
SustainPine v2.0
|
1188
|
|
• AutoFact: Transcription elongation factor SPT6 n=1 Tax=Arabidopsis thaliana RepID=F4I9Y7_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).
|
0.0
|
|
• Blast2go: transcription elongation factor spt6
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene13334
|
SustainPine v2.0
|
302
|
|
• AutoFact: Polyribonucleotide phophorylase (Fragment) n=1 Tax=Spinacia oleracea RepID=Q41370_SPIOL
|
2.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein Sb02g003900; Sorghum bicolor (Sorghum) (Sorghum vulgare).
|
0.0
|
|
• Blast2go: polyribonucleotide nucleotidyltransferase
|
9.65427e-38
|
|
Internal
|
