Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA mismatch repair protein, C-terminal

Term: IPR013507  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene33282 SustainPine v2.0 871
AutoFact: transitional endoplasmic reticulum ATPase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing ntpase domain-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene35508 SustainPine v2.0 439
AutoFact: putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] dbj|BAD53067.1| putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiamin pyrophosphokinase 1-like 0.0
Internal
sp_v2.0_unigene43155 SustainPine v2.0 496
AutoFact: Predicted protein n=1 Tax=Hordeum vulgare subsp. vulgare RepID=F2CVK8_HORVD 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: dna mismatch repair protein 0.0
Internal
sp_v2.0_unigene51671 SustainPine v2.0 330
AutoFact: mismatch repair-related protein [Cryptococcus neoformans var. neoformans JEC21] gb|AAW42965.1| mismatch repair-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna mismatch repair protein 1.17975e-24
C-terminus
sp_v2.0_unigene65075 SustainPine v2.0 417
AutoFact: pfam02138, Beach, Beige/BEACH domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd40 and beach domain-containing protein 0.0
Internal
sp_v2.0_unigene66453 SustainPine v2.0 285
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein n=5 Tax=Arabidopsis RepID=F4JEX5_ARATH 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fidgetin-like protein 1-like 8.63117e-34
Internal
sp_v2.0_unigene66535 SustainPine v2.0 340
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SAN5_RICCO 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 1.88627e-22
C-terminus
sp_v2.0_unigene69478 SustainPine v2.0 532
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 3.0e-11
FL-Next: tr=Os01g0958900 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna mismatch repair protein mlh1 3.43537e-15
C-terminus
sp_v2.0_unigene73219 SustainPine v2.0 294
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mismatch repair endonuclease pms2-like 4.57954e-21
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain