Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: K Homology domain, type 1

Term: IPR004088  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene18403 SustainPine v2.0 3032
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana] dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF01176.1| hypothetical protein [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kh domain-containing protein at4g18375-like 0.0
Complete
sp_v2.0_unigene20822 SustainPine v2.0 794
• AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: splicing factor 1 2.38427e-37
Internal
sp_v2.0_unigene21362 SustainPine v2.0 1128
• AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: splicing factor 1 0.0
N-terminus
sp_v2.0_unigene21634 SustainPine v2.0 2145
• AutoFact: putative RNA binding protein [Oryza sativa Japonica Group] gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica Group] dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE59537.1| hypothetical protein OsJ_1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: poly -binding 0.0
Complete
sp_v2.0_unigene21846 SustainPine v2.0 770
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
sp_v2.0_unigene22389 SustainPine v2.0 3106
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana] gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana] gb|AAP68215.1| At1g51580 [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kh domain-containing protein at4g18375-like 0.0
Complete
sp_v2.0_unigene23402 SustainPine v2.0 715
• AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: abc transporter b family member 0.0
C-terminus
sp_v2.0_unigene23786 SustainPine v2.0 1028
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 6.31538e-19
C-terminus
sp_v2.0_unigene24877 SustainPine v2.0 412
• AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 8.0e-36
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: abc transporter b family member 1.61961e-35
Putative C-terminus
sp_v2.0_unigene25219 SustainPine v2.0 2002
• AutoFact: putative KH domain containing protein (ISS) [Ostreococcus tauri] emb|CAL53341.1| putative KH domain containing protein (ISS) [Ostreococcus tauri] 7.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kh domain-containing protein at4g18375-like 0.0
Complete
sp_v2.0_unigene25392 SustainPine v2.0 1875
• AutoFact: 3'-5' exonuclease domain-containing protein-like [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3 -5 exonuclease and kh-i domain-containing protein 0.0
Complete
sp_v2.0_unigene25678 SustainPine v2.0 2296
• AutoFact: putative nucleic acid binding protein [Platanus x acerifolia] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kh domain-containing protein at4g18375-like 0.0
Complete
sp_v2.0_unigene25740 SustainPine v2.0 2029
• AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 7.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: splicing factor 1 0.0
C-terminus
sp_v2.0_unigene25770 SustainPine v2.0 588
• AutoFact: [A] COG5176 Splicing factor (branch point binding protein) 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kh domain-containing protein 0.0
C-terminus
sp_v2.0_unigene25878 SustainPine v2.0 871
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana] gb|AAP37761.1| At5g53060 [Arabidopsis thaliana] gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana] 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kh domain-containing protein at4g18375-like 0.0
C-terminus
sp_v2.0_unigene26004 SustainPine v2.0 3905
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64022.1| unknown protein [Arabidopsis thaliana] gb|AAM44907.1| unknown protein [Arabidopsis thaliana] gb|AED95351.1| RNA-b 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene26358 SustainPine v2.0 1927
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] sp|Q0WLR1.1|QKIL1_ARATH RecName: Full=KH domain-containing protein At4g26480; AltName: Full=Quaking-like protein 1 dbj|BAF01946.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85206.1| R 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-binding kh domain-containing protein 0.0
Complete
sp_v2.0_unigene26832 SustainPine v2.0 2856
• AutoFact: upstream element-binding protein [Arabidopsis thaliana] gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana] gb|AAM15002.1| unknown protein [Arabidopsis thaliana] gb|AAM15045.1| unknown protein [Arabidopsis thaliana] dbj|BAE98938.1| hypothetical protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: upstream element-binding protein 0.0
Complete
sp_v2.0_unigene27018 SustainPine v2.0 667
• AutoFact: [V] COG1132 ABC-type multidrug transport system, ATPase and permease components 2.8026e-45
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: abc transporter b family member 1-like 0.0
Internal
sp_v2.0_unigene27024 SustainPine v2.0 1566
• AutoFact: ABC transporter B family member 15 n=3 Tax=Arabidopsis RepID=AB15B_ARATH 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: abc transporter b family member 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain