Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site

Term: IPR002464  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene67480 SustainPine v2.0 323
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RMI9_RICCO 6.0e-39
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna 1.28505e-38
Internal
sp_v2.0_unigene67509 SustainPine v2.0 470
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase ino80 complex-like 1 0.0
Internal
sp_v2.0_unigene68789 SustainPine v2.0 380
AutoFact: Adenylate kinase 1, putative n=1 Tax=Ricinus communis RepID=B9RMJ0_RICCO 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adenylate kinase b 1.31077e-22
Putative N-terminus
sp_v2.0_unigene71834 SustainPine v2.0 199
AutoFact: putative ATP-dependent DNA helicase RecQ [Arabidopsis thaliana] 7.0e-10
FL-Next: sp=ATP-dependent DNA helicase Q-like 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent dna helicase q-like 5-like 2.11299e-13
Internal
sp_v2.0_unigene80936 SustainPine v2.0 565
AutoFact: pfam02212, GED, Dynamin GTPase effector domain 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.93737e-33
C-terminus
sp_v2.0_unigene82846 SustainPine v2.0 527
unknown
sp_v2.0_unigene83088 SustainPine v2.0 517
AutoFact: SelP_N multi-domain protein 5.0e-06
unknown
sp_v2.0_unigene83354 SustainPine v2.0 538
AutoFact: Gag-pol polyprotein, putative [Solanum demissum] 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Putative C-terminus
sp_v2.0_unigene83368 SustainPine v2.0 259
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 3.0e-20
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 1.63176e-26
Internal
sp_v2.0_unigene92262 SustainPine v2.0 530
AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.37591e-43
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain