Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA topoisomerase, type IA

Term: IPR000380  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2878 SustainPine v2.0 1486
AutoFact: DNA topoisomerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SU60_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: dna topoisomerase 0.0
Putative Complete
sp_v2.0_unigene4624 SustainPine v2.0 2654
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene14702 SustainPine v2.0 2041
AutoFact: myosin XI [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myosin-h heavy chain-like 0.0
Putative Complete
sp_v2.0_unigene25793 SustainPine v2.0 615
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: myosin subfamily xi heavy chain 0.0
C-terminus
sp_v2.0_unigene25820 SustainPine v2.0 2303
AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 2.45808e-31
Complete
sp_v2.0_unigene26020 SustainPine v2.0 929
AutoFact: unconventional myosin [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: myosin-h heavy chain-like 0.0
Internal
sp_v2.0_unigene27342 SustainPine v2.0 1551
AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 0.0
FL-Next: tr=Myosin class 11-1; Adiantum capillus-veneris (Maidenhair fern). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene33259 SustainPine v2.0 653
AutoFact: DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9RRL8_RICCO 0.0
FL-Next: sp=DNA topoisomerase; Vitis vinifera (Grape). 0.0
Blast2go: dna topoisomerase iii beta 0.0
Internal
sp_v2.0_unigene37072 SustainPine v2.0 683
AutoFact: unconventional myosin [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: myosin-h heavy chain-like 0.0
Internal
sp_v2.0_unigene37616 SustainPine v2.0 354
AutoFact: DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9SPT5_RICCO 1.0e-31
FL-Next: sp=DNA topoisomerase; Ricinus communis (Castor bean). 0.0
Blast2go: dna topoisomerase 1-like 2.88532e-31
Internal
sp_v2.0_unigene37698 SustainPine v2.0 450
AutoFact: Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9RWS3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: myosin subfamily xi heavy chain 0.0
Internal
sp_v2.0_unigene39671 SustainPine v2.0 340
AutoFact: DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9RRL8_RICCO 2.0e-27
FL-Next: sp=DNA topoisomerase; Ricinus communis (Castor bean). 0.0
Blast2go: dna topoisomerase iii beta 0.0
Putative C-terminus
sp_v2.0_unigene42184 SustainPine v2.0 370
AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 4.2039e-45
FL-Next: tr=Myosin class 11-1; Adiantum capillus-veneris (Maidenhair fern). 0.0
Blast2go: myosin-like protein 0.0
Internal
sp_v2.0_unigene43037 SustainPine v2.0 272
AutoFact: Myosin family protein with Dil domain [Arabidopsis thaliana] gb|AED92851.1| Myosin family protein with Dil domain [Arabidopsis thaliana] 1.0e-33
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: myosin-h heavy chain-like 7.96156e-35
Internal
sp_v2.0_unigene44826 SustainPine v2.0 490
AutoFact: myosin [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene45853 SustainPine v2.0 301
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 8.0e-30
FL-Next: tr=Myosin class 11-2; Adiantum capillus-veneris (Maidenhair fern). 0.0
Blast2go: myosin-like protein 8.12413e-35
Internal
sp_v2.0_unigene48925 SustainPine v2.0 259
AutoFact: DNA topoisomerase, type IA, core n=1 Tax=Arabidopsis thaliana RepID=F4JRX3_ARATH 1.0e-17
FL-Next: sp=DNA topoisomerase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase 1-like 7.73178e-22
Internal
sp_v2.0_unigene53782 SustainPine v2.0 355
AutoFact: Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9RWS3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: myosin family protein with dil domain 0.0
Putative C-terminus
sp_v2.0_unigene55982 SustainPine v2.0 246
AutoFact: Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9S596_RICCO 6.0e-35
FL-Next: tr=Myosin XI, putative; Ricinus communis (Castor bean). 0.0
Blast2go: myosin 2 4.5772e-41
Internal
sp_v2.0_unigene58409 SustainPine v2.0 163
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: myosin class 11-2 2.42783e-25
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain